Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1635 132 8e-25
seq1043 87.8 3e-11
>seq1635
Length=11578
Score = 132 bits (146), Expect = 8e-25
Identities = 219/311 (70%), Gaps = 5/311 (2%)
Strand=Plus/Minus
Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135
|||||||||||||||| || ||||||| |||| || ||| | || || | ||||||||
Sbjct 5202 TGCCGTCGGTGCCGTTCTTGAACCCGATCGGCGCCGACAGGCCGGAGGCGAGTTCGCGGT 5143
Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAAT 2175195
|||||||||||||||||||||||||||| | || ||||||| | ||||| | | |
Sbjct 5142 GCACCTGGCTCTCGGTGGTGCGCGCGCCGATCGCCCCCCACGAGATCAGGTCGCCGATGT 5083
Query 2175196 AGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCC-ACGGGCTGGCCGACGTCGACGACC 2175254
| ||| | | | || |||||| | ||| | ||| |||| | | || |
Sbjct 5082 ACTGCGGCGAGATCACGTCCAGGAACTCG-CTGCCGGCCGGCAGGCCCA-GCCG--GTTG 5027
Query 2175255 AGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCG 2175314
| ||| |||||| | |||| || ||||| || | | |||| | | ||||
Sbjct 5026 ATCTCGATCAGCAGCTGCCGCGCGATGCGCAGGCCCTCGTCGATGCGGAAGCTCTCGTCC 4967
Query 2175315 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 2175374
|||| |||||| || |||||||||||| || || |||||||||||||| |||| ||
Sbjct 4966 AGGTACGGGTCGTTGATCAGGCCCTTCCAGCCCACCGTCGTGCGCGGCTTCTCGAAGTAC 4907
Query 2175375 GCGCGCATGAC 2175385
| ||||| ||
Sbjct 4906 ACCCGCATCAC 4896
>seq1043
Length=3339
Score = 87.8 bits (96), Expect = 3e-11
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGTCAGACGAGGCC 2233150
|||||| | || |||||||| ||||||||||||| |||||| || || | ||| |||
Sbjct 3221 GTCGCCGTGCCGACCGAGACGGTCTATGGCCTCGCCGCCGATGCAACGGACGCCGACGCC 3280
Query 2233151 GTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCA 2233206
|| ||||||| || |||||||||||| ||| | ||||||| | ||||| ||
Sbjct 3281 GTCGCCCGCATCTATGCCGCCAAGGGCCGCCCGAGCTTCAACCCGCTGATCGTCCA 3336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915876110153159
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |