Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq599 111 1e-19 seq3158 109 4e-19 >seq599 Length=174198 Score = 111 bits (122), Expect = 1e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||| |||||||| ||||| ||| |||| | || Sbjct 69523 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCCGAGAGGGTGCGGCCGTCT 69582 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || || || ||||||||||| || |||||||||||| | || | ||||||||||| Sbjct 69583 TCGAGCTGTTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCCTCCTTGTC 69641 >seq3158 Length=82937 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 ||| || || | ||| |||| |||| || | ||||| |||||||||||||| || || Sbjct 52408 ATTACCACCACGCAATCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATC 52349 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 || || | || |||| || ||||||||||| || ||||| ||||| || || ||| | Sbjct 52348 GGAAAGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGG 52289 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCT 34925 || | || || || || || | | ||||| || ||| | || | || | | Sbjct 52288 TGGAATACCTTCTTTATC-TTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATT 52230 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || | || ||||| |||||||| |||||||| || ||||||||||| Sbjct 52229 CGACTTCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Score = 105 bits (116), Expect = 4e-18 Identities = 147/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || || ||||| |||||||| ||||| || |||| | || Sbjct 51531 AGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTGCGGCCGTCC 51472 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| |||||||||||| | || | |||||||| || Sbjct 51471 TCAAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGAATGCCCTCCTTATCC 51412 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||| || || ||||||| ||| | ||| || || | ||| || Sbjct 51411 TGAATCTTGGTTTTCAC--AT--TATCGATGGTATCAGAAGACTCAACCTCTAGGGTGAT 51356 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||||| || |||||||| || Sbjct 51355 GGTCTTTCCTGTCAGGGTCTTGAC 51332 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| || || |||||||||||||| || || |||| | || Sbjct 51227 AGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCC 51168 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||||| |||||||||||| | || | |||||||| || Sbjct 51167 TCGAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCC 51108 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || | | ||| || || | || || Sbjct 51107 TGGATCTTGGTCTTAAC--AT--TGTCGATAGTATCGCTAGACTCCACCTCGAGAGTGAT 51052 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||||| || | |||||| || || ||||||||| Sbjct 51051 GGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCATG 51015 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||||| ||||| || || | ||| || || |||||||| ||||| || Sbjct 51774 CCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAG 51715 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || ||||| || ||||||||||||| || ||||||||| | || Sbjct 51714 AGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGA 51655 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | ||||| ||| ||| | || | || || || || Sbjct 51654 ATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACT 51595 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||| || || | ||| || || || |||||||| Sbjct 51594 TCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||||| ||||| || || | ||| || || |||||||| ||||| || Sbjct 52176 CCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAG 52117 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || ||||| || ||||||||||||| || ||||||||| | || Sbjct 52116 AGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGA 52057 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | ||||| ||| ||| | || | || || || || Sbjct 52056 ATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACT 51997 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||| || || | ||| || || || |||||||| Sbjct 51996 TCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325678982584739