Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_022968.1 Length=148567 Score E Sequences producing significant alignments: (Bits) Value seq2529 84.2 2e-11 seq2374 84.2 2e-11 >seq2529 Length=4813 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 60773 AATTGGTCGGAGCGGCAGGATTCGAACCTGCGACCCAGTGCATCCAAGGCACCCACGCTG 60832 |||||||||||||| ||||||||||||| |||||| || |||| || |||| Sbjct 3916 AATTGGTCGGAGCGATAGGATTCGAACCTACGACCCTCTGGTCCCAAACCAGATGCGCT- 3974 Query 60833 ACCAGACTGCGCTACGCTCCGAAGGTGCAGA 60863 ||||||||||||||||||||||||| || || Sbjct 3975 ACCAGACTGCGCTACGCTCCGAAGGCGCCGA 4005 >seq2374 Length=1501 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 66032 TGGTGGGGCATGAAGGATTCGAACCTTCGACCTTCGGCTTAAGAGGCCGCTACTCTAACC 66091 ||||||| | ||||||||||||||||||||||| ||| ||||||| ||||| ||||| | Sbjct 274 TGGTGGGTCCTGAAGGATTCGAACCTTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 215 Query 66092 GCTGAGTTAATACCCC 66107 ||||| ||| | ||| Sbjct 214 ACTGAGCTAAGAACCC 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475265719100520