Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3158 89.7 4e-13 >seq3158 Length=82937 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| || || ||||| || ||||| || |||| |||| || || Sbjct 51016 ATGCAGATTTTCGTCAAGACCTTGACAGGAAAGACCATCACTCTCGAGGTGGAGTCTAGC 51075 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | | || || ||||| ||||| || ||| | || || ||| Sbjct 51076 GATACTATCGACAATGTTAAGACCAAGATCCAGGATAAGGAGGGCATTCCTCCAGACCAG 51135 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | || | ||| || || ||||| ||||||| | || || | ||||| ||| Sbjct 51136 CAACGCTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTGTCCGACTATAAC 51195 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||||||| || || || | ||| |||| Sbjct 51196 ATTCAAAAAGAATCCACCCTCCACTTGGT 51224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398859877776409