Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq1349 102 2e-17 >seq1349 Length=8317 Score = 102 bits (112), Expect = 2e-17 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 30220 GAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCTTGTCCTTCCA 30279 ||| |||||||||||||| || || |||||| || |||| |||||||||||||||| Sbjct 7763 GAAGACCACGCGGTGCCACTCCGTCAGCTCCTTCATCTCGCCGCTCTGCTTGTCCTTCCA 7704 Query 30280 GCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCGTTGGGCATATAGCGAGT 30339 || |||| ||||||||| ||||| |||| ||| |||| |||| | ||| | Sbjct 7703 GCGCTCGGTGGTGGCGATGGTGACGTTGCAGACCCGCCCGCCGCTGGGGAAGGTGCGCAT 7644 Query 30340 TTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTAACG 30385 || ||||| |||| |||||| || | ||||| ||||| ||| Sbjct 7643 CTCGGGGTCCTTCCCGAGGTTGCCGACGATGATGACCTTGTTGACG 7598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145632379763664