Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023580.1 Length=57775 Score E Sequences producing significant alignments: (Bits) Value seq1231 351 4e-92 >seq1231 Length=29534 Score = 351 bits (388), Expect = 4e-92 Identities = 937/1397 (67%), Gaps = 104/1397 (7%) Strand=Plus/Minus Query 44907 AACCGGTGATGCTTGGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTAC 44962 ||||||||||||| |||||| |||| |||||||||| | |||| | |||| | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 44963 ATGGGCATCACGCA-CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGTTT 45021 | ||| | | || |||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 45022 CGGCCAAACCCATCCCTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGT 45081 | || | || || | | | | | |||||| |||| || |||||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 45082 GCGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACTATGACTGACAT 45141 ||| | | | | | ||| ||||| | ||| ||| ||| | ||| | || || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 45142 AATCCACGAATACGGGCTTGACCCCGAGG-CAATCTCGGAAGCTCTGCAACGGTCCATCG 45200 |||| |||||| || || | | || | | ||||| || || | || || |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCG 3798 Query 45201 GATGCGAACGAATCGAAGCATCCGGCGAGGGCTGGCTGTTCGCCAACAACGACTGCGTAC 45260 | ||| || || | | ||||| |||||| | | || ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 45261 CCGAAACCGAGTCGATGGACGACAACTCGGTGGACCTGATCGTCACCAGTATTCCGTTCT 45320 || | | | ||||||| ||||| ||||||||||||||| || |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 45321 CCAATCACTACGAATACACCCCGTCCTACAACGACTTCGGTCACACCGACGACAACGCGC 45380 ||| |||||||| ||||| ||| ||||||||||||||| ||||| ||||| ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 45381 ATTTCTGGGCGCAAATGGACTACCTCACACCGCAACTGTTGCGCATCCTTGCGCCCGGGC 45440 |||||| ||||| ||||| | || || ||| | ||| | || || ||||| || | Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 45441 GGATCTACGCCTG---CCACGTCAAAGACCGCATCTTGTTCGGCAATGTCACCGGCGCTG 45497 || | |||||| |||||| || ||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 45498 GCGTGCCCACCGTGTCACCATTTCACGCCGAAGCG-ATCTTCCAC---GGCCGCAAACAC 45553 | ||||| ||||| || || |||||| ||| | ||| ||| ||| ||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCC-AAGTGCATCGAGCACTATATGCGC---CAC 3445 Query 45554 GGCTTTGACTACCTCGGCATGATCACCGTTGTCACCGATGTGGTACGGGAAAACAACCAG 45613 ||||| | | | | |||||||||||||| |||||||| || || || || ||||||||| Sbjct 3444 GGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAG 3385 Query 45614 ACGTACCGGTTGGGTTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTTGG 45669 || ||||| || | || | ||| || ||| || |||| ||| ||||||||| || Sbjct 3384 ACCTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGG 3329 Query 45670 CTCCCCGGAATACGTTCTGCTGTTCCATAAACCGCAGACAGACAGATCGAAGGGATACGC 45729 | ||| |||||||| |||||| | | || ||||| | ||| | || || || || Sbjct 3328 CAGCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGC 3269 Query 45730 CGACACCCCCGTCACCAAATCCAAGGACGA---CTACACCCGTGCCCGCTGGCAGGTGGA 45786 |||||| || |||||||| || | ||| ||||| || || || |||||||| || Sbjct 3268 CGACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGA 3212 Query 45787 CGCGCACGCGTTCTGGCGCTCGAGCGGCAACAGGACACTGACAGCCGACGAGCT------ 45840 ||| ||||| ||||||||||| |||||| | | | || || | |||||| Sbjct 3211 CGCCCACGCCTTCTGGCGCTCCAGCGGCGAGCGCCCGCTCACCGTGCGCGAGCTATGGGA 3152 Query 45841 CGCCG-----CGATGCCACCAGA--CCAGCTGGCC---TC-----ACTGTTCACCAAGCA 45885 | || || | || ||| | | |||||| || | ||| || | | Sbjct 3151 GGTCGAAGACCGCTTCCTCCATATGGCGACTGGCCAAATCGCGAAGCGGTT--CCGCGAA 3094 Query 45886 CAGCCTGCAGGA---CGTCTACGACTACCAGTCACACGTCCGCATCGGTGAG--CAACTC 45940 || | || || | || || | || || | || ||| |||||| ||| || | | Sbjct 3093 GAGAC-GCGCGACCTCATCCACAGCCACAAGGCGCATGTCGACATCGGCGAGGCCATCGC 3035 Query 45941 GAA--GGTCG--CGGCGCC--------CTGCCTGC----CACGTTCATGGCCATCGC-CC 45983 | | || || |||| || | |||||| ||| |||||||| ||||| || Sbjct 3034 GGATCGGCCGGCCGGCTCCGGTCTGGGCAGCCTGCCGCGCACCTTCATGGCGATCGCGCC 2975 Query 45984 CGGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGAACCGGATGATCACCTTGAAC 46039 ||| | | |||| || |||||||| ||||| | |||||| || | ||| Sbjct 2974 CGGCA-----GCCACCATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAAC 2920 Query 46040 GGGGAGCAGAAACGCCGCAA---CGTTCAAATGCACGTGTGCCCCCTGCAGTTCGACATC 46096 || |||||| |||||| || | | |||||| |||||||| |||||||||||| Sbjct 2919 GGCGAGCAG---GTCCGCAAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATC 2863 Query 46097 GTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGC 46156 || |||||||||||| || | ||| | | |||||| |||||||||| |||||| || Sbjct 2862 GTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGC 2803 Query 46157 GGGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACT---CGGTCGGCGCGGCCGTGGTGTC 46213 || || |||||||||||| |||| || || || |||||| |||||| || | Sbjct 2802 GGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCGGTCGCCGCGGCGCCGGCAGC 2746 Query 46214 GAGCTGAATCCCGGCTA 46230 || || || |||| ||| Sbjct 2745 GAACTCAACCCCGACTA 2729 Score = 226 bits (250), Expect = 1e-54 Identities = 278/376 (74%), Gaps = 8/376 (2%) Strand=Plus/Minus Query 44201 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTAC 44260 ||||| |||||| || || ||||| ||| | | || || |||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 44261 CAGTCGTTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCG 44320 ||| ||||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 44321 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACC 44380 || || ||||| |||||||||||||| || ||||| |||| ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 44381 GGCGCGGCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTC 44440 ||| || ||||| | | |||||||| ||||| |||||| | || |||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 44441 TACCCACATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA- 44499 ||||| || || || | || |||||||| ||||| |||| |||||||| ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 44500 ATCCCCAGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGT 44556 ||| ||| ||||| || | ||||| |||||| || ||||| || | || Sbjct 5473 CGCCCGAGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 44557 GCAGTGGCATGAGGTC 44572 || ||||| |||||| Sbjct 5417 GCGCTGGCACGAGGTC 5402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184750762665114