Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3259 165 6e-35 seq2301 87.8 1e-11 seq3095 86.0 5e-11 >seq3259 Length=396074 Score = 165 bits (182), Expect = 6e-35 Identities = 749/1168 (64%), Gaps = 21/1168 (2%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||||||||| ||||| | ||| | |||||||| | || |||| |||| Sbjct 234019 GTCATGACACCACCAGCAGTTTCGATACCCAAGGAAAGAGGGGCAACGTCAAGAAGGAGG 233960 Query 281723 ATAT--TTTGAAGTTTTTCATCAGTTT--GACCAACAAGAATAGCTGCTTGAATAGCAGC 281778 || | || | || || | || | | | |||||| | || ||||| | ||| || Sbjct 233959 ATCTCGTTGGTAGACTTGGAGGAGGTATCGCCGGACAAGA-TGGCAGCTTGGACAGCCGC 233901 Query 281779 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 |||||| |||||||| || ||||| || | | || || | | || || ||||| || Sbjct 233900 ACCATAGGCAACAGCCTCGTCAGGGTTGATGGATTTGTTGGGCTCCTTTCCGTTGAAGAA 233841 Query 281839 ATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTT 281897 | |||| | | ||| | ||| |||||||| | || || ||||| || ||||||| Sbjct 233840 GTCGGAAACCATCT-TCTGGATCTTGGGAATACGGGTAGAACCACCAACCAAGACAATTT 233782 Query 281898 CATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 281957 | || || || || || | || | ||| | || ||||||||| || | Sbjct 233781 CGTGAACAGAGGACTTGTCAATCTTGGCATCGCGAAGGACACGTTCAACGGGCTCCATGG 233722 Query 281958 CAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TA 282016 | || || | ||| || ||||||||||| ||| | || || || | || Sbjct 233721 TGGATCGGAAAAGGTCCTGGCAGAGTTCTTCGAAACGAGCACGGGT--GATGGAAGTGTA 233664 Query 282017 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 || ||||| |||||||| | ||| || | ||||| | ||| || | | ||| || || Sbjct 233663 GAAATCAATACCTTCGAAGAGAGAGTCGATCTCAATGGAAGTCTGGGCAGCAGAGGAAAG 233604 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT 282135 | || || ||||| || || || || | || | || | || | ||||| Sbjct 233603 AGTGCGCTTGGCACGCTCGCAAGCAGTGCGGAGACGACGGAGAGCACGAG--GATTGGAG 233546 Query 282136 CAAA--TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 282193 | | || | || | || | |||||| || | || | | |||||||| || Sbjct 233545 GAGAGATCCTTCTTGTGCTTGCGCTTGAATTCGTTGACGAAGTGGTTAACAAGACGGTTG 233486 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| || ||||| ||||| | || | || | || | | |||| ||| | || Sbjct 233485 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCAGTGGACTTGACTTCGAAGATACCC 233426 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 ||||||| || ||| || | ||||||| ||| || || |||| ||| ||||| || ||| Sbjct 233425 TCTTCAATAGTCAACAGGGAAACATCAAAGGTGCCGCCGCCCAGATCGAAAATTAGGACA 233366 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || || || || || || || || ||||||| ||| |||||||| || || Sbjct 233365 TTACGCTCGCCCTCCGTCTTCTTGTCCAGGCCGTACGCAATAGCGGCAGCAGTAGGCTCG 233306 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 ||||| || | | |||||||||||| ||||| || || || || || ||||| | Sbjct 233305 TTAATGATACGAAGAACATTAAGACCGGCAATAAGACCGGCGTCCTTGGTCGCTTGGCGC 233246 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAAT 282492 || ||||| || || || || || ||||| | || || | |||| || || | Sbjct 233245 TGAGAATCATTGAAGTAAGCTGGGACAGTGACGACAGCGT-TGTTGACAGTACCACCGAG 233187 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA 282552 ||||| || |||| | |||| || | | || ||| || || |||| ||||| | Sbjct 233186 GTAAGCCTCGGCAGTTTCTCTCATCTTGGTGAGAACCATGGACGAGATTTCCTCTGGGGT 233127 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTT-CAAAATATGGTTTATTACCAACATTAA 282611 | || || | || | | || |||| || || | | || | || | || Sbjct 233126 GAACTGTTTCGTCTCGCCCTTAAATTCGACTTGCATAACAGGCTTCCCTGCC-TTGTCAA 233068 Query 282612 TAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTA 282670 ||| || || || ||| |||||| || | || || || || ||| || | | | Sbjct 233067 TAATCTTGAACGGGAAATGTTTCATGTCGGCCTGGAC-CTCTGCGTCGGCGAACTTGCGA 233009 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | ||||| || || || | ||| ||| | || || | || |||||| || Sbjct 233008 CCAATGAGACGTTTGGCGTCGAAGACAGTGTTGATGGGGTTCATGGCGACTTGATTCTTT 232949 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||| || || ||| | || || ||||| || | ||| | || ||||| || || Sbjct 232948 GCGGCATCACCGATTAGACGCTCGGTATCTGTGAAGGCAACGAACGAGGGAGTAGTTCGG 232889 Query 282791 TTACCTTGATCATTCGCAATAATTTCAA 282818 || || || || || || || || |||| Sbjct 232888 TTTCCCTGGTCGTTGGCGATGATCTCAA 232861 >seq2301 Length=238476 Score = 87.8 bits (96), Expect = 1e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 ||| || || ||||| | |||||||||||||| ||| ||||| |||||||| | || || Sbjct 80142 TGAGTTCTTTTTCCACGCTATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 80201 Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAA 435227 |||||| ||||| || || || |||| |||||||| Sbjct 80202 TGCTGAGACTGGCTACATCCAGCGAAAGCTTGTCAA 80237 >seq3095 Length=411055 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 282326 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 ||||| | || |||||||| || |||| || |||||||||||||| |||| | | Sbjct 143934 TCTTGCTCCTTCTCAAGACCGTAGGCAAGGGCCGCAGCAGTTGGTTCGTTAACGACACGA 143993 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 | || || ||||| ||||| || ||||| || |||||||| | ||| || ||||| Sbjct 143994 AGGACGTTGAGACCGGCAATCTGACCAGCATCCTTCGTGGCTTGACGTTGAGAGTCGTTG 144053 Query 282446 AAATATGCAGGAACAGT 282462 || || |||||||| || Sbjct 144054 AAGTAAGCAGGAACGGT 144070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740459497610706