Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023714.1 Length=153882 Score E Sequences producing significant alignments: (Bits) Value seq204 93.3 4e-14 seq654 82.4 8e-11 >seq204 Length=38477 Score = 93.3 bits (102), Expect = 4e-14 Identities = 121/160 (76%), Gaps = 12/160 (8%) Strand=Plus/Plus Query 114273 CTGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTA--CG-TCAT 114329 ||||| | ||||||||||||||| || | || || |||||||| |||| || ||| Sbjct 25181 CTGCCCGGTCGGCCCGGGCCGTGGATCAGGCGCCGGATCGCTGGTGGCCTATTCGCTCAA 25240 Query 114330 GGGCATC-ACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACC 114388 | || | ||||||||| ||| || ||||| ||||| |||||||||||||| | |||| Sbjct 25241 GATCACCGACCTCGATC--CCC--TCCAGTACAACCTGCTGTTCGAGCGCTTCCTGAACC 25296 Query 114389 CGGACCGC--CCCGACTTCCCCGACATCGACGTCGACTTC 114426 |||| ||| ||| | || ||| ||||| |||||||| Sbjct 25297 CGGAGCGCGTGTCGA--TGCCGGACTTCGACATCGACTTC 25334 >seq654 Length=51332 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 91636 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 91695 ||||| || | |||| ||| || |||| || ||||||| || ||||||||||||||||| Sbjct 33192 CGGGGAGTGGCGCAGTCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA 33133 Query 91696 TCCTGTCACCCCGAC 91710 ||||||| ||||||| Sbjct 33132 TCCTGTCTCCCCGAC 33118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492272979039920