Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq671 89.7 2e-12 seq3003 86.0 2e-11 >seq671 Length=22199 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 403941 GCGCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTAGGTTCGAA 404000 ||||| ||||||||| ||||||||||||||||||||||||| | || || |||||||| Sbjct 9217 GCGCCCGTAGCTCAGTTGGATAGAGCACGAGCCTTCTAAGCTTGGGGCCGCAGGTTCGAT 9276 Query 404001 TCCTACCAGGCGCG 404014 |||| || |||||| Sbjct 9277 TCCTGCCGGGCGCG 9290 >seq3003 Length=8662 Score = 86.0 bits (94), Expect = 2e-11 Identities = 240/366 (66%), Gaps = 2/366 (1%) Strand=Plus/Minus Query 69514 ATTGCTGGTAATGTTGGTACACCTGAAGCTGTTCGTGAACTTGAAAATGCAGGCGCAGAT 69573 || || || || || || || || ||||| || || || || || ||||| || Sbjct 7758 ATCGCCGGCAACGTCGGCACGCCGGAAGCGGTGATCGACCTGGAGAACTGGGGCGCCGAC 7699 Query 69574 GCTACAAAAGTTGGTATTGGCCCAGGTAAAGTATGTATTACTAAAATCAAAACTGGTTTT 69633 || || || || || || ||||| || || || || ||||| || || || || || Sbjct 7698 GCCACCAAGGTCGGCATCGGCCCCGGCAAGGTGTGCATTACCCGCATGAAGACCGGCTTC 7639 Query 69634 GGTACTGGCGGCTGGCAGTTAGCTGCATTGCGTTGGTGTTCAAAAGTAGCTACTAAACCA 69693 || || |||||||||||||| | || ||| ||||| | || || || || || Sbjct 7638 GGCACCGGCGGCTGGCAGTTGTCCGCGTTGAAGTGGTGCGCCCGCGTGGCCACCAAGCCG 7579 Query 69694 ATAATTGCTGATGGTGGTATTCGTACTAACGGTGATATTGCTAAATCTGTACGTTTTGGC 69753 || ||||| || || || || || |||| || || || || || || || ||| Sbjct 7578 ATCATTGCGGACGGCGGCATCCGCGAGCACGGCGACATCGCCAAGAGCGTGCGCTTCGGC 7519 Query 69754 GCTTCAATGGTTATGATTGGTTCGCTATTTGCGGGTCACGAGGAATCACCAGGTGAGACG 69813 || | ||||| ||||| || || | | ||||| |||||||| || || || |||| Sbjct 7518 GCCACGATGGTGATGATCGGCTCCATGCTGGCGGGCCACGAGGAGTCGCCGGGCCAGACC 7459 Query 69814 ATAGaaaaaaaTGGTAAATTATATAAAGAGTATTTTGGATCCGCTTCTGAATATCAA-AA 69872 | ||| |||| || | | || || ||||| || ||| || || | |||| || Sbjct 7458 GTCGAAGTGGATGGCAAGCTGTTCAAGGAATATTTCGGCAGCGCCTCGGACT-TCAACAA 7400 Query 69873 GGGTGA 69878 ||| || Sbjct 7399 GGGCGA 7394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591839400298688