Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023729.1 Length=43036 Score E Sequences producing significant alignments: (Bits) Value seq1231 329 9e-86 >seq1231 Length=29534 Score = 329 bits (364), Expect = 9e-86 Identities = 598/858 (70%), Gaps = 29/858 (3%) Strand=Plus/Minus Query 36059 AACCAGTGATGCTCGGGCAA-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTAC 36114 |||| |||||||| ||||| |||| |||||||||| | |||| | |||| | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 36115 ATCGGCATCACGCA-CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTT 36173 ||||| | | || |||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 36174 CGGCCAAACCCATCCCTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGT 36233 | || | || || | | | | | | |||||| ||||||| |||||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 36234 GCGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCAT 36293 ||| | | | | | ||| ||||| | ||| ||| ||| | ||| || || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 36294 CATTCATGAGTACGGACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCG 36352 ||| | || || || || | | || | | |||| ||||| | ||||| |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCG 3798 Query 36353 GATGCGAACGCATCGAAACATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTC 36412 | ||| || || | || || || ||| | | || ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 36413 ACGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCT 36472 | || | | | ||| || | ||||| || ||||| |||||| ||| |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 36473 CCAACCACTACGAGTACACGCCGAGCTACAACGATTTCGGCCACACCGACGACAACGCGC 36532 ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 36533 ATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCC 36592 |||||| ||||||||||| | || || ||| | ||||| || || |||||||||| Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 36593 GTATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCG 36649 | | |||||| |||||| |||||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 36650 GCGTGCCCACCGTGTCCCCGTTTCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACG 36706 | ||||| ||||| ||||| |||||| || ||| ||| ||| |||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACG 3444 Query 36707 GCTTCGACTACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGA 36766 ||||| | | | | ||||||||||||||||| ||||| || ||||| || |||||||||| Sbjct 3443 GCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGA 3384 Query 36767 CGTACCGGCTGGGCTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGC 36822 | ||||| ||| | || | ||| || ||| || |||| ||| ||||||||| |||| Sbjct 3383 CCTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGC 3328 Query 36823 TCCCCGGAATACATTCTGCTGTTCCACAAACCGCAAACAGACAGGTCCCGTGGGTATGCC 36882 ||| |||||| | |||||| | | ||| ||||||| ||| | || || || |||||| Sbjct 3327 AGCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCC 3268 Query 36883 GACGTACCGGTCATCAAG 36900 ||| ||||||| |||| Sbjct 3267 GACACGCCGGTCACCAAG 3250 Score = 288 bits (318), Expect = 3e-73 Identities = 290/374 (78%), Gaps = 6/374 (2%) Strand=Plus/Minus Query 35353 TTCACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTAC 35412 ||||| |||||| || |||||||||||| | || |||||||||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 35413 CAGTCGTTCCTCGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCC 35472 ||| ||||||| ||| ||||| |||||||| ||||| | ||||| |||||||| ||| Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 35473 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACC 35532 ||||| ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 35533 GGTGCGGCGCTCACGCGTTGGTTCCAACGGGACTCCACGAAGGCGAACAACCTCACCCTC 35592 || |||||||| || | ||||| || || | ||||||| | | ||||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 35593 TACCCGCATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCAA 35652 |||||||| || ||||| |||||||||||||||||||| | ||||| | ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 35653 TCCCCGGCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTG 35709 |||| |||||||| ||| |||| ||||||||| ||||| |||| ||| Sbjct 5473 CGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTG 5417 Query 35710 TTGTGGCATGAGGT 35723 ||||| ||||| Sbjct 5416 CGCTGGCACGAGGT 5403 Score = 136 bits (150), Expect = 1e-27 Identities = 206/287 (72%), Gaps = 22/287 (8%) Strand=Plus/Minus Query 37197 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 37251 |||||| ||| |||||||| ||||| ||||| | | |||| || |||||||| Sbjct 3004 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 2950 Query 37252 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 37308 ||||| | |||||| || | ||||| |||||| |||||| || | | Sbjct 2949 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 2893 Query 37309 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGATCGGCTGATCACTCGTTTCTCGAAT 37368 | |||||| |||||||| |||||||||||||| || ||||||||| || | ||| | Sbjct 2892 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 2833 Query 37369 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 37428 | |||||| |||||||||| |||||| |||| || |||||||||||| |||| || | Sbjct 2832 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 2776 Query 37429 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 37472 | ||| |||||||||||| || ||| || || |||| ||| Sbjct 2775 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137587912310556