Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq3180 113 3e-20 seq2546 87.8 1e-12 >seq3180 Length=115279 Score = 113 bits (124), Expect = 3e-20 Identities = 128/169 (76%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 94599 CTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 94658 |||||| ||||| || | ||| || || || |||||||| |||||||||| || || || Sbjct 1234 CTTGATCAGGCCGGTGATCACGTCGACCGAAGGCCGCTGGGTCGCCAGGATCAGGTGGAT 1175 Query 94659 GCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTA 94718 |||||| || |||||||||||||| | ||| | ||| | || | | |||||| Sbjct 1174 GCCGGCGGCGCGCGCCTTCTGCGCCAGGCGAGCGATGAGCTCTTCGATC---TTCTTG-- 1120 Query 94719 GCCAC--CCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGT 94765 |||| ||||||| ||||| |||||||| || | ||| |||||||||| Sbjct 1119 CCCACCACCATCATCAGGTCGGCGAGTTCGTCGATCACCACCACGATGT 1071 Score = 86.0 bits (94), Expect = 4e-12 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 94980 GTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCGATCCGGTCGCGCC 95039 ||| |||||||| | | ||| | ||||||| | |||||||| |||||||| | ||| Sbjct 769 GTAAAGCAGCGACAGGATCATCGCGTTGATGCCGACCGACTTGCCGGATCCGGTGGTGCC 710 Query 95040 AGCCACCAGCAGATGCGGCATCTTGGCCAGGTTCAGGGA-GACGTCCTTACCCTCGACGT 95098 |||||||||| |||||||||||||||||| || | | ||| || || ||| || Sbjct 709 GGCCACCAGCACGTGCGGCATCTTGGCCAGG-TCGGCCACGACAGGATTGCCGACGATGT 651 Query 95099 CCTTGCCCA 95107 ||||||||| Sbjct 650 CCTTGCCCA 642 >seq2546 Length=2143 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 94581 CCGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGT 94640 ||||| |||| ||| |||||| | ||| || | || || || ||||| |||||||| Sbjct 809 CCGCGTCGGCAGGTTCGCCTTGATCACGCCGGTGATGACGTCGACCGAGGGGCGCTGCGT 750 Query 94641 CGCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCG 94688 ||||| || ||| || ||||| ||||| |||||||| ||||||| ||| Sbjct 749 CGCCATGATGAGGTGGATGCCCGCCGCGCGCGCCTTTTGCGCGAGGCG 702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340107170447408