Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023746.1 Length=57387 Score E Sequences producing significant alignments: (Bits) Value seq1231 374 3e-99 >seq1231 Length=29534 Score = 374 bits (414), Expect = 3e-99 Identities = 937/1396 (67%), Gaps = 102/1396 (7%) Strand=Plus/Minus Query 43146 AACCAGTGATGCTCGGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTAC 43201 |||| |||||||| |||||| |||| |||||||||| | |||| | |||| | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 43202 ATGGGCATCACGCA-CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTT 43260 | ||| | | || |||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 43261 CGGCCAAACCCATCCCTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGT 43320 | || | || || | | | | | |||||| |||| || |||||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 43321 GCGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACAT 43380 ||| | | | | | ||| ||||| | ||| ||| ||| | ||| |||| || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 43381 CATTCATGAGTACGGACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCG 43439 ||| | || || || || | | || | | |||| ||||| | ||||| |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCG 3798 Query 43440 GATGTGAGCGCATCGAAGCATCCGGTGAGGGATGGGTGTTCGTCAACAACGACTGCGTTC 43499 | ||||| || | | || || || ||| | | | ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 43500 ACGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACTAGCATTCCGTTCT 43559 | || | | | ||| || | ||||| || ||||| ||||| ||| |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 43560 CCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGC 43619 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 43620 ATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCC 43679 |||||| ||||||||||| | || || ||| | ||||| || || |||||||||| Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 43680 GTATCTACGCCTGC---CACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCG 43736 | || |||||| ||||| |||||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 43737 GCGTGCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACG 43793 | ||||| || || |||||||||||| || ||| ||| ||| |||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACG 3444 Query 43794 GCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGA 43853 ||||| | | | | |||||||||||||| |||||||| || ||||| || |||||||||| Sbjct 3443 GCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGA 3384 Query 43854 CGTACCGGCTGGGCTGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCT 43910 | ||||| ||| | || | | | ||| || |||| ||| |||||||| |||| Sbjct 3383 CCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCA 3327 Query 43911 CCCCGGAATACGTTCTGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCG 43970 ||| |||||||| |||||| | | ||| ||||||| ||| | || || || |||| Sbjct 3326 GCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCG 3267 Query 43971 ACACACCCGTCACCAAATCCAAGGACGA---ATACACCCGTGCCCGTTGGCAGGTGGACG 44027 |||| || |||||||| || | ||| |||| || || || |||||||| |||| Sbjct 3266 ACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACG 3210 Query 44028 CGCACGCGTTCTGGCGATCGAGCGGAAACAGGACACTGACAGCCGACGAGCT------CG 44081 | ||||| |||||||| || ||||| | | | || || | |||||| | Sbjct 3209 CCCACGCCTTCTGGCGCTCCAGCGGCGAGCGCCCGCTCACCGTGCGCGAGCTATGGGAGG 3150 Query 44082 CCG-----CGCTGCCACCAGA--CCAGTTGGCCTCACTGTTCACCAAGCACAGCC-TGAA 44133 || |||| || ||| | | ||||| | || | |||| || ||| Sbjct 3149 TCGAAGACCGCTTCCTCCATATGGCGACTGGCCAAA----TCGCGAAGCGGTTCCGCGAA 3094 Query 44134 G-GACG----------TCTACGACTACCAGTCACACGTCCGCATCGGTGAG--CAACTCG 44180 | |||| || || | || || | || ||| |||||| ||| || | || Sbjct 3093 GAGACGCGCGACCTCATCCACAGCCACAAGGCGCATGTCGACATCGGCGAGGCCATCGCG 3034 Query 44181 AA--GGTCG--------CGGT----GC--CCTGCCTGCTACGTTCATGGCCATCGC-CCC 44223 | || || |||| || |||||| || |||||||| ||||| ||| Sbjct 3033 GATCGGCCGGCCGGCTCCGGTCTGGGCAGCCTGCCGCGCACCTTCATGGCGATCGCGCCC 2974 Query 44224 GGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGAACCGGATGATCACCTTGAACG 44279 || | | |||| || |||||||| ||||| | |||||| || | |||| Sbjct 2973 GGCA-----GCCACCATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACG 2919 Query 44280 GGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGTGCCCCCTGCAGTTCGACATCG 44336 | |||||| |||||| || | | | ||| || |||||||| ||||||||||||| Sbjct 2918 GCGAGCAG---GTCCGCAAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCG 2862 Query 44337 TTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCG 44396 | |||||||||||| || | ||| | | |||||| |||||||||| |||||| ||| Sbjct 2861 TCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCG 2802 Query 44397 GGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACT---CGGTCGGCGCGGCCGTGGTGTCG 44453 | || |||||||||||| |||| || || || |||||| |||||| || || Sbjct 2801 GCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCGGTCGCCGCGGCGCCGGCAGCG 2745 Query 44454 AGCTGAATCCCGGCTA 44469 | || || |||| ||| Sbjct 2744 AACTCAACCCCGACTA 2729 Score = 226 bits (250), Expect = 1e-54 Identities = 278/376 (74%), Gaps = 8/376 (2%) Strand=Plus/Minus Query 42440 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTAC 42499 ||||| |||||| || || ||||| ||| | | || || |||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 42500 CAGTCGTTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCG 42559 ||| ||||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 42560 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACC 42619 || || ||||| |||||||||||||| || ||||| |||| ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 42620 GGCGCGGCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTC 42679 ||| || ||||| | | |||||||| ||||| |||||| | || |||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 42680 TACCCACATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA- 42738 ||||| || || || | || |||||||| ||||| |||| |||||||| ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 42739 ATCCCCAGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGT 42795 ||| ||| ||||| || | ||||| |||||| || ||||| || | || Sbjct 5473 CGCCCGAGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 42796 GCAGTGGCATGAGGTC 42811 || ||||| |||||| Sbjct 5417 GCGCTGGCACGAGGTC 5402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183509213988978