Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3158 161 2e-34 >seq3158 Length=82937 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| | || ||| || |||||||| ||| ||||| || || ||||| | Sbjct 52406 TACCACCACGCAATCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGG 52347 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| ||||| |||||||||||||| |||| ||||||||||| | Sbjct 52346 AAAGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTG 52287 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| |||||||||||||||| || || || ||||| ||||| | ||| | Sbjct 52286 GAATACCTTCTTTATCTTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGA 52227 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || || || || |||| ||||| || || |||||||| Sbjct 52226 CTTCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Score = 145 bits (160), Expect = 1e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| ||||| || || |||||||| || || ||||| || || || | | ||| Sbjct 51230 CGAAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCG 51171 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || ||||||||||| | | ||| || |||||||| || || |||||| Sbjct 51170 TCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTA 51111 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| | || ||||| || || ||||| ||| || || || | ||| || Sbjct 51110 TCCTGGATCTTGGTCTTAACATTGTCGATAGTATCGCTAGACTCCACCTCGAGAGTGATG 51051 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| |||||||| ||||| || || |||||||| Sbjct 51050 GTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCAT 51016 Score = 140 bits (154), Expect = 6e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| ||||| ||||||||||| || |||||||| | Sbjct 51548 TACCACCGCGAAGACGAAGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCG 51489 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||||| || || || || ||||| ||||| | | ||| || ||||||| Sbjct 51488 AAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAG 51429 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| |||||||| | ||| ||||| || || |||||| || || | Sbjct 51428 GAATGCCCTCCTTATCCTGAATCTTGGTTTTCACATTATCGATGGTATCAGAAGACTCAA 51369 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 | || | || || ||||| ||||||| ||||| || Sbjct 51368 CCTCTAGGGTGATGGTCTTTCCTGTCAGGGTCTTGAC 51332 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| || || || | || || || |||||||| || || || || |||| Sbjct 51776 TACCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAG 51717 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||| |||||||| || || ||||| | | || || ||||| | Sbjct 51716 AGAGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTG 51657 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| |||||||| || | |||||| || ||||| || || | ||| | Sbjct 51656 GAATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAA 51597 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||| || || || || || || |||||||| Sbjct 51596 CTTCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| || || || | || || || |||||||| || || || || |||| Sbjct 52178 TACCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAG 52119 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||| |||||||| || || ||||| | | || || ||||| | Sbjct 52118 AGAGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTG 52059 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| |||||||| || | |||||| || ||||| || || | ||| | Sbjct 52058 GAATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAA 51999 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||||||||| || || || || || || |||||||| Sbjct 51998 CTTCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981783410200059