Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2399 116 4e-21 seq3158 114 1e-20 seq3102 91.5 1e-13 >seq2399 Length=446898 Score = 116 bits (128), Expect = 4e-21 Identities = 341/518 (66%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || || || ||| ||||||||||| Sbjct 271221 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTCGTCTTACCGGCCAACGAAATGTTGTC 271280 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| | ||||| | || | || || || Sbjct 271281 CATGAAGTCGAATGGGTTGGTGGCGTTGTAAAATTTCTTGTTACCAAGGGCCACAAGTAG 271340 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 || ||| || || ||||||||||||| ||||||| || | ||||| || || | || Sbjct 271341 TCTGTCAGCAACGAACTCAATGTACTGGCACATGAGCTTAGAATTCATTCCAAGTAGGGC 271400 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || | || ||| || || || ||||| || || || ||||| ||| ||||| Sbjct 271401 GCAAGGTAGGGCATCCGTCAAGAATTCTTTCTCGATCTCAACTGCCTCGGTGATGATGGC 271460 Query 120591 GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATG-CG-CGTTCGG--TAGTACAGGCACG 120646 | | |||||| | || | || || || | | | || || || | Sbjct 271461 CTGGA-----CGGCCGGCGGGCCTGGG--CGGTGACGAAGATGAGAAAAGAGGAGACAGG 271513 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 ||||||| ||||| || |||||||| || || ||||| || || || || ||||| | Sbjct 271514 CAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCAG 271573 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||| | || | |||| | |||| |||| || || ||| ||||| | | Sbjct 271574 GCATAAGACCACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATAC 271633 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCGATC 120825 |||| ||| |||||||| |||| |||| || || || | ||||| | | |||| Sbjct 271634 CCTCGACGGCCGCAAAGGCAACCAGCCGCTGAGCGAAAGT-GGATTCTTGGTCTTGGATC 271692 Query 120826 CACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 || |||||||| || ||||| || || | ||| || Sbjct 271693 CATCGAATGGCCCAGTCAGCCTTCTTACGAATGCAAGG 271730 >seq3158 Length=82937 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||||| ||||| || || || || ||| || |||| |||||||||| Sbjct 51221 AAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTCGAGC 51162 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || | || | || |||||||| ||||| ||||| ||||| || |||| Sbjct 51161 TGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGGATC 51102 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | || ||| | | |||||| |||| |||| ||| || || Sbjct 51101 TTGGTCTTAACATTGTCGATAGTATCGCTAGACTCCACCTCGAGAGTGATGGTCTTTCCT 51042 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGG 133662 |||| || || |||||||||||||||| Sbjct 51041 GTCAAGGTCTTGACGAAAATCTGCATGG 51014 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| ||||| ||||| || || ||||| || | ||| ||| | || || || | Sbjct 51751 ATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCA-TCTTCAAGTT 51693 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || | |||||||||||| || || || || |||||||| ||| | Sbjct 51692 GTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT-TGAATT 51634 Query 133576 TTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || | || | | |||| ||||||| || || || || | |||| || |||||| Sbjct 51633 TTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGCCG 51574 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || | ||||| |||||||||||||| Sbjct 51573 GTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| ||||| ||||| || || ||||| || | ||| ||| | || || || | Sbjct 52153 ATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCA-TCTTCAAGTT 52095 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || | |||||||||||| || || || || |||||||| ||| | Sbjct 52094 GTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT-TGAATT 52036 Query 133576 TTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || | || | | |||| ||||||| || || || || | |||| || |||||| Sbjct 52035 TTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGCCG 51976 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || | ||||| |||||||||||||| Sbjct 51975 GTTAAGGTTTTCACGAAAATCTGCAT 51950 >seq3102 Length=369104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCGTAAA 133530 || || || || ||||||| || || |||| ||| ||||||||||| || || ||| Sbjct 110036 TTTTGGATGTTATAATCGCTCAAAGT--ACGACCGTCTTCGAGCTGCTTTCCGGCAAAAA 110093 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | ||||||||||| || |||||||| ||||| || |||||| || | | | Sbjct 110094 TCAATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGCTTTTCACATTGT 110153 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | |||||| | | ||| || || | ||||| ||| |||||||| || || || |||| Sbjct 110154 CGATTGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 110213 Query 133651 A 133651 | Sbjct 110214 A 110214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483399765152440