Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3224 140 8e-28 >seq3224 Length=193136 Score = 140 bits (154), Expect = 8e-28 Identities = 394/600 (66%), Gaps = 15/600 (3%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| || ||||| || || || | | ||| | || || |||||||| | | | Sbjct 109571 TATTTCGGGTTCAAGACACTGGAGAGGTCATATCTGCTGCGAATCAATGGCAAAGTTGCT 109630 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT--- 110420 || || || ||||||||| | | |||||||| |||| ||||| || | ||||| Sbjct 109631 GAGCGGCCCCAACACATGATCATGCGTGTTGCCGTTGGCATTCACGGCGAGGATATCGAG 109690 Query 110421 AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTAT---TCATGCTACT 110477 ||| | || || ||| || | | || | |||| | | ||||||| || Sbjct 109691 AAAACG---ATGGAGACCTATAATTTGAT--GTCCCA-GAAATTTTTCACTCATGCTTCT 109744 Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537 || || || || || || || || ||| ||||||| || || || | | Sbjct 109745 CCCACTCTTTTCAATGCGGGGACGCCACAGCCACAGATGGCTTCCTGTTTCCTCATTGAT 109804 Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597 || || || ||| || || |||||||||||| | || ||| ||| || ||||| Sbjct 109805 ATGAAGGAAGATAGCATCGACGGTATTTATGATACCCTCAAAACCTGTGCCCTGATTTCC 109864 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 |||| |||| || |||||| || | |||||| ||| || | | || | | || Sbjct 109865 AAAACAGCTGGTGGTATTGGTCTTAATGTTCATCGTATCCGTGCGACTGGTTCCTACATT 109924 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 ||| | |||| || | || | ||| | ||||| ||| | | ||||| ||| |||| Sbjct 109925 GCAGGAACGAATGGCTCCTCCAATGGGATCGTTCCTATGCTTCGTGTCTTTAACAACACC 109984 Query 110718 GCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774 || ||| || |||||||||| |||| | || | || || |||||||| ||| Sbjct 109985 GCTCGATACGTCGATCAAGGTGGCAATAAGCGGCCAGGTGCCTTCGCCATCTATCTTGAA 110044 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834 |||||||| || ||||| || || || | || |||||||| || || ||| || ||| Sbjct 110045 CCTTGGCACTCCGATATTTTCGAGTTTCTGGATCTTCGTAAGAACCACGGAAAGGAGGAA 110104 Query 110835 CAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTT 110894 ||||| |||||| | || ||| | |||| | | ||||| ||||||||||| ||| Sbjct 110105 GTGAGAGCCCGTGATCTTTTCCTTGCTCTTTGGACTCCCGATTTGTTCATGAAACGGGTT 110164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186759867778241