Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3158 93.3 1e-13 >seq3158 Length=82937 Score = 93.3 bits (102), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA--A 206241 ||| || || |||||||| || ||||| | || || || |||||| || |||| | Sbjct 51334 CAAGACCCTGACAGGAAAGACCATCACCCTAGAGGTTGAGTCTTCTGATACCATCGATAA 51393 Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 | | ||| ||| |||||| || || || || ||| || ||| ||| | | ||| Sbjct 51394 TGTGAAAACCAA--GATTCAGGATAAGGAGGGCATTCCTCCAGACCAGCAACGTTTGATC 51451 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 ||||| || |||||| | || || || | ||| | | ||||| ||| |||||||||| Sbjct 51452 TTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCGGATTATAACATCCAGAAAGAA 51511 Query 206362 TCTACTCTTCACCTTGT 206378 || |||||||||||||| Sbjct 51512 TCAACTCTTCACCTTGT 51528 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || |||||||| || || || ||||| ||| || || || | || Sbjct 52193 AAGACCCTGACGGGAAAAACCATTACGTTAGAAGTCGAATCGTCAGATACCATTGATAAC 52252 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| |||||||| ||| || || || |||| ||||| Sbjct 52253 GTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAACAGCGACTCATCTTT 52312 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||| | |||||||| | || | ||||||||||| | ||||| || Sbjct 52313 GCTGGAAAGCAACTCGAAGATGGCCGTACGCTTTCCGATTACAACATTCAGAAGGAAAGC 52372 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||||| || | ||||||||| Sbjct 52373 ACTCTGCATTTGGTTTTGAGA 52393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181768090423001