Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq372 154 1e-32 seq3355 104 2e-17 >seq372 Length=11520 Score = 154 bits (170), Expect = 1e-32 Identities = 370/559 (66%), Gaps = 32/559 (6%) Strand=Plus/Plus Query 142241 TCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGA 142300 ||||||| || |||||||| ||| ||||||| | ||||| || | ||| |||| |||| Sbjct 9552 TCTTCGGCCACCAGATGCGGTTCGATCTGGCCGAGGGCTTCCCGGTGCTCACCACCAAGA 9611 Query 142301 AGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACA 142360 | ||||| ||| |||||||||||||| | ||||||||||| ||||| || ||| Sbjct 9612 AACTGCACCTGCGCTCGATCATCGTCGAGTTGCTGTGGTTCCTGCGCGGCGACACCAACG 9671 Query 142361 TCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCA 142420 | | || || |||| ||| |||| |||||||| |||||||| |||| || Sbjct 9672 TGCGCTGGCTGCAGGATCGCAAGGTCAGCATCTGGGACGAATGGGCGGATGAGGCGGGTG 9731 Query 142421 ACCTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAG 142480 | ||||| || || || |||||||| ||| || || | || || ||| Sbjct 9732 ATCTCGGCCCGGTGTATGGCAAGCAATGG----------CGCGACTGGGTGACGGCGGA- 9780 Query 142481 ATGACGTCACAGACGAACCGATCGATCAGATCCGCCGGATCATTACTGACTTGAAGAAGT 142540 | || ||| ||||| |||||| || | | ||| | |||| Sbjct 9781 CGGCCGGCAC----------ATCGACCAGATCAAGGGGCTGGTGCACGACATCAAGACCA 9830 Query 142541 CTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGG 142600 || || || || || ||||||||||| |||||||| | || || ||| ||||| Sbjct 9831 ACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTCCACGCCATGG 9890 Query 142601 CACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCAT 142660 | || | |||||||| ||||||| | | |||| |||| || ||||| Sbjct 9891 CGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCG---CGAACGGCCGGCTGTCGC 9947 Query 142661 GCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGT 142720 || || || ||||| ||||| ||| ||||| ||||| ||||||||||| || | Sbjct 9948 TGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCT 10007 Query 142721 ACGCGCTTCTCACACAGCTCATTGCTCGCG----AATGCGGTCTGGAACTCGGAGACTTC 142776 | ||||| ||||| || || |||| ||| ||||||| ||||| | || || ||| Sbjct 10008 ATGCGCTGCTCACCCA---CA-TGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTC 10063 Query 142777 GTCCACACCTTCGGCAATT 142795 || ||| |||| ||| Sbjct 10064 ATCTGGACCGGCGGCGATT 10082 >seq3355 Length=30814 Score = 104 bits (114), Expect = 2e-17 Identities = 364/567 (64%), Gaps = 30/567 (5%) Strand=Plus/Minus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| | |||||||| ||| | ||| | ||||| || || | |||| |||||| Sbjct 9121 TTCGGCTACCAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAG 9062 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 | || ||||| || |||||| ||| || ||||||||||| | ||| | ||| | Sbjct 9061 GTCCACCTGAAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAAC 9002 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422 || | || | ||| | | ||| | |||||||| |||||||| | | ||| || Sbjct 9001 AACAAGCTGCGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGAC 8942 Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAGAT 142482 || || || || |||||| ||||||| |||| ||| | || | || Sbjct 8941 CTGGGGCCGGTGTACGGCGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCG-------- 8890 Query 142483 GACGTCACAGACGAACCGATCGATCAGATCCGCCGGATCATTACTGACT-TGAAGAAGTC 142541 | |||| |||| |||||| |||| | | | ||| | ||| Sbjct 8889 ---GGCACA----------TCGACCAGATC-GCCGAAGCGGTGAAGACCATCAAGGCCAA 8844 Query 142542 TCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGC 142601 ||| | || || || |||||||| ||| |||||| || || || | ||||| Sbjct 8843 TCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGC 8784 Query 142602 ACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAG--AAGCGTCTGTCA 142659 || | || || ||| | | ||||| ||| |||||| || | |||| |||| Sbjct 8783 GCTGGCGCCCTGCCACGCGTTCTTCCAGTTCTACGTCGCG--GACGGCAAGC---TGTCG 8729 Query 142660 TGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCG 142719 ||||||||||| ||||| || ||| ||||| ||||| ||||||||||| || Sbjct 8728 TGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGC 8669 Query 142720 TACGCGCTTCTCACACAGCTCATTGCTCGCGAATGCGGTCTGGAACTCGGAGACTTCGTC 142779 |||||||| ||||| || | || || | | |||| |||| |||| |||||| || Sbjct 8668 TACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACTTCATC 8609 Query 142780 CACACCTTCGGCAATTCGCACATCTAC 142806 ||| |||| | | ||||||||| Sbjct 8608 TGGACCGGCGGCGACTGCCACATCTAC 8582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500477422028560