Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq372 122 1e-22 seq3355 120 4e-22 >seq372 Length=11520 Score = 122 bits (134), Expect = 1e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || |||| ||||| ||||||||||| |||||||| |||||||| || || || ||| Sbjct 10035 TGCGCCAGCATGTGGGTGAGCAGCGCATAGCTGGCGATGTTGAACGGCACGCCAAGGAAG 9976 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 ||||| |||| | |||||| || || ||| ||| |||| || || || |||| Sbjct 9975 ATGTCGGCCGAGCGCTGGTAGAGTTGCAGCGACAGCCGGCCGTTCGCGACATAGGTCTGG 9916 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 ||||| || ||||||| ||||||||||||| | || || ||||||||||||| | | Sbjct 9915 AACAGGCAATGACACGGCGCCAGCGCCATGGCGTGGAGATCGCCGGGGTTCCAGGCGGTG 9856 Query 147178 AC 147179 || Sbjct 9855 AC 9854 >seq3355 Length=30814 Score = 120 bits (132), Expect = 4e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || || | ||||| ||||| |||| ||||||||| |||||||| || || |||||| Sbjct 8640 TGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGAAG 8699 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 ||||| | | |||||||||||||||||| |||| ||||| || ||||| |||||| Sbjct 8700 ATGTCGGCACTGCGCTGGTACAGCTGGCACGACAGCTTGCCGTCCGCGACGTAGAACTGG 8759 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGC 147173 | | |||||| |||| ||||||||| || | |||||| ||||||||| Sbjct 8760 AAGAACGCGTGGCAGGGCGCCAGCGCCATCTTCGGGATGTCCGCCACGTTCCAGGC 8815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583462610978400