Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_026588.1 Length=60285 Score E Sequences producing significant alignments: (Bits) Value seq1231 379 8e-101 >seq1231 Length=29534 Score = 379 bits (420), Expect = 8e-101 Identities = 650/926 (70%), Gaps = 33/926 (4%) Strand=Plus/Minus Query 44959 AACCGGTGATGCTTGGGCAG-GGCATGAACCTGCAAC---AGGCCCATGTCTGTGTCTAC 45014 ||||||||||||| |||||| |||| |||||||| | | ||| | || | | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 45015 ATCGGCATCACACACAAGTTCAACGACCTCATCCAAAGCTTGCACCGGATCCAGCGGTTC 45074 ||||| | ||||||||||||| ||||||| | |||||| ||||||| ||| Sbjct 4035 GTCGGCGTAGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTC 3976 Query 45075 GGCCAAACCCACCCCTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTG 45134 || | ||||| | | | | | |||||| ||||||| || ||||| || ||| Sbjct 3975 CAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTG 3916 Query 45135 CGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATC 45194 || | | | | | ||| ||||| | ||| ||| ||| | ||| || ||| Sbjct 3915 CGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATC 3856 Query 45195 ATCCACGAGTATGGACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGG 45253 |||| ||| ||||| || | | || | | |||| ||||| | ||||| ||||| Sbjct 3855 ATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGG 3797 Query 45254 GTGCGAACGCATCGAAGCCTCCGGCGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACC 45313 ||| || || | | | ||||| |||||| | | || ||||||||||||| Sbjct 3796 CGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGA 3737 Query 45314 CGAAACCAACAGCATGGCAGACAATTCGGTGGACCTGATCGTCACCAGCATTCCGTTCTC 45373 || | | | ||| || ||||| ||||||||||||||| ||| |||||| Sbjct 3736 TGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAG 3677 Query 45374 CAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCA 45433 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| Sbjct 3676 CAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCA 3617 Query 45434 TTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGGCG 45493 ||||| ||||||||||| | || |||||| | ||||| || || ||||| || || Sbjct 3616 TTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCG 3557 Query 45494 GATCTACGCCTGC---CATGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCAGG 45550 | || |||||| || || |||||||| ||| ||||||| || ||||||| || Sbjct 3556 GCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGG 3500 Query 45551 CGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGG 45607 || || |||||| |||||||||||| || ||| ||| ||| ||||| Sbjct 3499 TGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGG 3443 Query 45608 CTTCGACTACCTCGGCATGATCATCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGAC 45667 |||| | | | | |||||||||| ||| |||||||| || ||||| || ||||||||||| Sbjct 3442 CTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGAC 3383 Query 45668 GTACCGGCTGGGCTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTTGGCT 45723 ||||| ||| | || | ||| || ||| || |||| ||| ||||||||| ||| Sbjct 3382 CTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCA 3327 Query 45724 CCCCGGAATACGTTCTGTTGTTCCACAAACCGCAGACAGACAGGTCGAAGGGATACGCCG 45783 ||| |||||||| ||| || | | ||| ||||| | ||| | || || || |||| Sbjct 3326 GCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCG 3267 Query 45784 ACACCCCCGTCACCAAATCCAAGGACGA---CTACACCCGTGCCCGATGGCAGGTGGACG 45840 |||| || |||||||| || | ||| ||||| || || || |||||||| |||| Sbjct 3266 ACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACG 3210 Query 45841 CGCACGCGTTCTGGCGCTCGAGCGGC 45866 | ||||| ||||||||||| |||||| Sbjct 3209 CCCACGCCTTCTGGCGCTCCAGCGGC 3184 Score = 288 bits (318), Expect = 4e-73 Identities = 290/374 (78%), Gaps = 6/374 (2%) Strand=Plus/Minus Query 44253 TTCACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTAC 44312 ||||| |||||| || |||||||||||| | || |||||||||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 44313 CAGTCGTTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCC 44372 ||| ||||||| ||| ||||| | |||||| ||||| | ||||| |||||||| ||| Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 44373 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACC 44432 ||||| ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 44433 GGTGCGGCGCTCACGCGTTGGTTCCAACGGGACTCCACGAAGGCGAACAACCTCACCCTC 44492 || |||||||| || | ||||| || || | ||||||| | | ||||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 44493 TACCCGCATAAAGAACACGAGTTCTGGCTGTGGCTGAACACCTGGGCGGCGTTCGTGCAA 44552 |||||||| || ||||| |||||||||||||||||||| | |||||| | ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 44553 TCCCCGGCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTG 44609 |||| |||||||| ||| |||| ||||||||| ||||| |||| ||| Sbjct 5473 CGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTG 5417 Query 44610 TTGTGGCATGAGGT 44623 ||||| ||||| Sbjct 5416 CGCTGGCACGAGGT 5403 Score = 105 bits (116), Expect = 3e-18 Identities = 104/133 (78%), Gaps = 6/133 (5%) Strand=Plus/Minus Query 47120 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 47179 ||||||| | |||||||||||||| |||||||||||| || | ||| | | ||||| Sbjct 2884 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 2825 Query 47180 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 47237 | |||||||||| |||||| |||| || |||||||||||| |||| || || ||| Sbjct 2824 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 2768 Query 47238 -GGTCGGCGCGGC 47249 ||||| |||||| Sbjct 2767 CGGTCGCCGCGGC 2755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192782430647334