Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq1231 410 5e-110 >seq1231 Length=29534 Score = 410 bits (454), Expect = 5e-110 Identities = 657/926 (71%), Gaps = 33/926 (4%) Strand=Plus/Minus Query 46899 AACCGGTGATGCTCGGGCAG-GGCATGAACCTGCAGC---AGGCCCACGTCTGTGTCTAC 46954 ||||||||||||| |||||| |||| |||||||||| | |||| | || | | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 46955 ATCGGCGTCACGCA-CAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATCCAGCGGTT 47013 ||||||| | || ||||||||||||| | |||||| | |||||| ||||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 47014 CGGCCAAACCCACCCTTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGT 47073 | || | ||||| | | | | | |||||| ||||||| || ||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 47074 GCGGGTCGTCCGCGAGAAATGGGCGCAACACCGGGAGTTGACATCAACGATGACCGACAT 47133 ||| | | | | | ||| ||||||| ||| |||| ||| | ||| |||| || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 47134 CATCTACGAGTATGGGCTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCG 47192 |||| ||| ||||| || | | || | | |||| ||||| | ||||| |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCG 3798 Query 47193 GGTGCGAACGCATCGAAGCATCCGGCGAGGGGTGGCTGTTCGCCAACAACGACTGCGTGC 47252 | ||| || || | | ||||| || ||| | | || ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 47253 CCGAAACCGAGTCGATGGGCGACAGCTCGGTAGATCTGATTGTCACCAGCATTCCGTTCT 47312 || | | | ||| ||| | ||||| || ||||| |||||| ||| |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 47313 CAAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGC 47372 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 47373 ATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGGC 47432 |||||| ||||||||||| | || |||||| | ||||| || || ||||| || | Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 47433 GGATCTACGCCTGC---CACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAG 47489 || || |||||| ||||| |||||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 47490 GCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTTCAC---GGCCGCAAACACG 47546 | || || |||||| |||||||||||| || ||| ||| ||| |||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACG 3444 Query 47547 GCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGA 47606 ||||| | | | | |||||||||||||| |||||||| || ||||| || |||||||||| Sbjct 3443 GCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGA 3384 Query 47607 CGTACCGGCTGGGCTGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGCGTTGGCT 47663 | ||||| ||| | || | | | ||| || |||| ||| ||||||||| ||| Sbjct 3383 CCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCA 3327 Query 47664 CCCCGGAATACGTTCTGCTGTTCCACAAACCGCAGACAGACAGGTCGAAGGGATACGCCG 47723 ||| |||||||| |||||| | | ||| ||||| | ||| | || || || |||| Sbjct 3326 GCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCG 3267 Query 47724 ACACCCCCGTCACCAAATCCAAGGACGA---CTACAGCCGTGCCCGATGGCAGGTGGACG 47780 |||| || |||||||| || | ||| |||||||| || || |||||||| |||| Sbjct 3266 ACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACG 3210 Query 47781 CGCACGCGTTCTGGCGCTCGAGCGGC 47806 | ||||| ||||||||||| |||||| Sbjct 3209 CCCACGCCTTCTGGCGCTCCAGCGGC 3184 Score = 260 bits (288), Expect = 6e-65 Identities = 286/375 (76%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 46193 TTTACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTAC 46252 || || |||||| || |||||||||||| | || |||||||||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 46253 CAGTCGTTCCTAGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCC 46312 ||| ||||||| ||| ||||| |||||||| ||||| | ||||| |||||||| ||| Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 46313 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTAATGGACACC 46372 ||||| ||||| ||||||||||||||||| ||||| || | ||||| || ||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 46373 GGTGCGGCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCT 46431 || |||||||| || | |||||||| || ||| |||||| | | |||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCT 5535 Query 46432 GTACCCCCACAAGGAGCGCGAGTTCTTCTTGTGGCTCAACACCTGGGCCGCGTTCGTGCA 46491 ||||| |||||||| | ||||||| ||||||| || | |||||||| ||| |||| Sbjct 5534 CTACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCA 5475 Query 46492 ATCCCCGGCAGACCTCGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGT 46548 |||| |||||||| ||| |||| |||||| || ||||| |||| || Sbjct 5474 GCGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 46549 GCTGTGGCATGAGGT 46563 || ||||| ||||| Sbjct 5417 GCGCTGGCACGAGGT 5403 Score = 118 bits (130), Expect = 4e-22 Identities = 202/287 (70%), Gaps = 22/287 (8%) Strand=Plus/Minus Query 47947 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCGCC-TC---ACGTGTGG 48001 |||||| ||| |||||||| ||||| ||||| | | | || || |||||||| Sbjct 3004 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 2950 Query 48002 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTTCAA 48058 ||||| | |||||| || | ||||| |||||| |||||| || | Sbjct 2949 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 2893 Query 48059 ATGCACGTGTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATAACCCGGTTCTCGAAT 48118 | |||||| |||||| | |||||||||||||| ||||||||||| || | ||| | Sbjct 2892 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 2833 Query 48119 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 48178 | |||||| |||||||||| |||||| |||| || |||||||||||| |||| || | Sbjct 2832 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 2776 Query 48179 AAACTT---GGTCGGCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 48222 | ||| ||||| |||||| || ||| || || |||| ||| Sbjct 2775 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202535407134095