Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_026604.1 Length=53636 Score E Sequences producing significant alignments: (Bits) Value seq1231 378 2e-100 >seq1231 Length=29534 Score = 378 bits (418), Expect = 2e-100 Identities = 939/1396 (67%), Gaps = 102/1396 (7%) Strand=Plus/Minus Query 40636 AACCAGTGATGCTCGGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTAC 40691 |||| |||||||| |||||| |||| |||||||||| | |||| | |||| | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 40692 ATGGGCATCACGCA-CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTT 40750 | ||| | | || |||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 40751 CGGCCAAACCCATCCCTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGT 40810 | || | || || | | | | | |||||| |||| || |||||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 40811 GCGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACAT 40870 ||| | | | | | ||| ||||| | ||| ||| ||| | ||| |||| || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 40871 CATTCATGAGTACGGACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCG 40929 ||| | || || || || | | || | | |||| ||||| | ||||| |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCG 3798 Query 40930 GATGTGAGCGCATCGAAGCATCCGGTGAGGGATGGGTGTTCGTCAACAACGACTGCGTTC 40989 | ||||| || | | || || || ||| | | | ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 40990 ACGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACTAGCATTCCGTTCT 41049 | || | | | ||| || | ||||| || ||||| ||||| ||| |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 41050 CCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGC 41109 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 41110 ATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCC 41169 |||||| ||||||||||| | || || ||| | ||||| || || |||||||||| Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 41170 GTATCTACGCCTGC---CACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCG 41226 | || |||||| ||||| |||||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 41227 GCGTGCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACG 41283 | ||||| || || |||||||||||| || ||| ||| ||| |||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACG 3444 Query 41284 GCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGA 41343 ||||| | | | | |||||||||||||| |||||||| || ||||| || |||||||||| Sbjct 3443 GCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGA 3384 Query 41344 CGTACCGGCTGGGCTGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCT 41400 | ||||| ||| | || | | | ||| || |||| ||| |||||||| |||| Sbjct 3383 CCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCA 3327 Query 41401 CCCCGGAATACATTCTGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCG 41460 ||| |||||| | |||||| | | ||| ||||||| ||| | || || || |||| Sbjct 3326 GCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCG 3267 Query 41461 ACACACCCGTCACCAAATCCAAGGACGA---ATACACCCGTGCCCGATGGCAGGTGGACG 41517 |||| || |||||||| || | ||| |||| || || || |||||||| |||| Sbjct 3266 ACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACG 3210 Query 41518 CGCACGCGTTCTGGCGCTCGAGCGGCAACCGGTTACTGACCGCCGACGAGCT------CG 41571 | ||||| ||||||||||| |||||| | || || |||| |||||| | Sbjct 3209 CCCACGCCTTCTGGCGCTCCAGCGGCGAGCGCCCGCTCACCGTGCGCGAGCTATGGGAGG 3150 Query 41572 CCG--CACTGCCACCAGACCAGTTGGCCTCACTG-----TTCACCAAGCACAGCC-TGAA 41623 || || || || ||| |||| |||| || | |||| || ||| Sbjct 3149 TCGAAGACCGCTTCC--TCCATATGGC--GACTGGCCAAATCGCGAAGCGGTTCCGCGAA 3094 Query 41624 G-GACG----------TCTACGACTACCAGTCACACGTCCGCATCGGTGAG--CAACTCG 41670 | |||| || || | || || | || ||| |||||| ||| || | || Sbjct 3093 GAGACGCGCGACCTCATCCACAGCCACAAGGCGCATGTCGACATCGGCGAGGCCATCGCG 3034 Query 41671 AA--GGTCG--------CGGT----GC--CCTGCCTGCTACGTTCATGGCCATCGC-CCC 41713 | || || |||| || |||||| || |||||||| ||||| ||| Sbjct 3033 GATCGGCCGGCCGGCTCCGGTCTGGGCAGCCTGCCGCGCACCTTCATGGCGATCGCGCCC 2974 Query 41714 GGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGAACCGGATGATCACCTTGAACG 41769 || | | |||| || |||||||| ||||| | |||||| || | |||| Sbjct 2973 GGCA-----GCCACCATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACG 2919 Query 41770 GGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGTGCCCCCTGCAGTTCGACATCG 41826 | |||||| |||||| || | | | ||| || |||||||| ||||||||||||| Sbjct 2918 GCGAGCAG---GTCCGCAAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCG 2862 Query 41827 TTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCG 41886 | |||||||||||| || | ||| | | |||||| |||||||||| |||||| ||| Sbjct 2861 TCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCG 2802 Query 41887 GGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACT---CGGTCGGCGCGGCCGTGGTGTCG 41943 | || |||||||||||| |||| || || || |||||| |||||| || || Sbjct 2801 GCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCGGTCGCCGCGGCGCCGGCAGCG 2745 Query 41944 AGCTGAATCCCGGCTA 41959 | || || |||| ||| Sbjct 2744 AACTCAACCCCGACTA 2729 Score = 226 bits (250), Expect = 1e-54 Identities = 278/376 (74%), Gaps = 8/376 (2%) Strand=Plus/Minus Query 39930 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTAC 39989 ||||| |||||| || || ||||| ||| | | || || |||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 39990 CAGTCGTTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCG 40049 ||| ||||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 40050 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACC 40109 || || ||||| |||||||||||||| || ||||| |||| ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 40110 GGCGCGGCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTC 40169 ||| || ||||| | | |||||||| ||||| |||||| | || |||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 40170 TACCCACATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA- 40228 ||||| || || || | || |||||||| ||||| |||| |||||||| ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 40229 ATCCCCAGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGT 40285 ||| ||| ||||| || | ||||| |||||| || ||||| || | || Sbjct 5473 CGCCCGAGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 40286 GCAGTGGCATGAGGTC 40301 || ||||| |||||| Sbjct 5417 GCGCTGGCACGAGGTC 5402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171506510163756