Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3158 143 3e-29 seq3102 102 8e-17 >seq3158 Length=82937 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || ||||| |||||||| ||||||||||||||||| | || || || || Sbjct 51756 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 51697 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || |||||||| || || ||||| |||||||| || || || || || || || |||||| Sbjct 51696 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 51637 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||| || ||| | ||||||||| ||||| || || | || || || || Sbjct 51636 ATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTG 51577 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| |||||||| ||||| Sbjct 51576 CCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || ||||| |||||||| ||||||||||||||||| | || || || || Sbjct 52158 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 52099 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || |||||||| || || ||||| |||||||| || || || || || || || |||||| Sbjct 52098 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 52039 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||| || ||| | ||||||||| ||||| || || | || || || || Sbjct 52038 ATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTG 51979 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| |||||||| ||||| Sbjct 51978 CCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || |||||||| ||||||||||| |||||| Sbjct 51242 CCGCCACGGAGGCGAAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGAC 51183 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| ||||| ||||| || ||||| || || || Sbjct 51182 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGA 51123 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | || ||| || ||||| Sbjct 51122 ATGCCCTCCTTATCCTGGATCTTGGTCTTAACATTGTCGATAGTATCGCTAGACTCCACC 51063 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| || || || || || || |||||||| ||||| Sbjct 51062 TCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCAT 51016 Score = 105 bits (116), Expect = 7e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || ||| || | || || ||| |||||| ||||||||||| ||| || || | Sbjct 52393 TCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGAAAGCGTACGGCC 52334 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || ||||| || || || ||||| || | ||||| ||||| || || || |||||||| Sbjct 52333 ATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGAATACCTTCTTT 52274 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGTAA 134676 |||||||| ||| || | | || ||||| | || |||||||| || || | |||| Sbjct 52273 ATCTTGAATCTTT-GTCTTAACGTTATCAATGGTATCTGACGATTCGACTTCTAACGTAA 52215 Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||| || || | || || ||||| || ||||| Sbjct 52214 TGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 >seq3102 Length=369104 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 ||||||| ||||| || |||| | || || ||| |||||||| || || ||||||| Sbjct 110034 CCTTTTGGATGTTATAATCGCTCAAAGTACGACCGTCTTCGAGCTGCTTTCCGGCAAAAA 110093 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| |||||||| || || || ||||| || || || || || || ||| || || Sbjct 110094 TCAATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGCTTTTCACATTGT 110153 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||| ||| || || || || || ||||| || ||||| | || || |||| Sbjct 110154 CGATTGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 110213 Query 134704 A 134704 | Sbjct 110214 A 110214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505376408852120