Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq3355 89.7 6e-13 seq1091 89.7 6e-13 >seq3355 Length=30814 Score = 89.7 bits (98), Expect = 6e-13 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 176399 CACCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCC 176458 |||||| ||| ||| ||| | ||||||||| || || | | | ||| | || || Sbjct 8561 CACCTGCTCGTGGTGGTTGCTGTAGATGTGGCAGTCGCCGCCGGTCCAGATGAAGTCGCC 8620 Query 176459 GACTTCCAAGCCGCATTCCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTT 176518 ||| ||| | |||| | | ||||||||| || || || || ||||| ||||||||| Sbjct 8621 GACCGCCAGGTCGCACTGCTGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTT 8680 Query 176519 GAATGGAAGCCCCAAGAAGACGTC--CACGGACCGCTGATTCCAAAGGCAGGACAGTTTC 176576 ||| || | |||| ||||| ||| ||| | ||||| | | |||| ||||| || Sbjct 8681 GAACGGCACGCCCAGGAAGATGTCGGCACTG--CGCTGGTACAGCTGGCACGACAGCTTG 8738 Query 176577 CCGTTGCGGACATAGAACTGGAA-ACCGTAGTGACACGGCGGCAAAGCCAT 176626 |||| ||| ||||||||||| | || ||| || |||| || ||||| Sbjct 8739 CCGTCCGCGACGTAGAACTGGAAGAACG-CGTGGCAGGGCGCCAGCGCCAT 8788 >seq1091 Length=4087 Score = 89.7 bits (98), Expect = 6e-13 Identities = 270/412 (66%), Gaps = 9/412 (2%) Strand=Plus/Minus Query 141295 GGCGCGGATTTCCCGGTATTCCTTGACGCACAAAACCGCGAACA---CGCACTCGCCCGG 141351 |||||| ||||||| || ||||| || | | | ||||| | ||| |||||||| Sbjct 1386 GGCGCG-ATTTCCCCGTTTTCCTGCACCCGGAGACGCGCGAGGAATTCGCCCTCGCCCGC 1328 Query 141352 ATCGAACGCAAGATCGGCGAA-GGCTACAAGGGATTCGAATGCGCCTTTGACACGTCGAT 141410 | ||| ||||||| ||||| |||||| | || ||| | | | || || || | Sbjct 1327 ACCGAGCGCAAGA-CGGCGCCCGGCTACCACGGGTTCAGCTTCCACGCCGATCCGGCGGT 1269 Query 141411 CACCATCGAACAAGACCTGATGCGCCGCGATCTTACCATCAACGCCATGGCAATGTTTAT 141470 ||| | || | ||||| || ||||| || ||||||||||||||||| | Sbjct 1268 CACGCTGGAGGAGGACCTCGCCCGGCGCGACCTGACCATCAACGCCATGGCCCAGGCCGG 1209 Query 141471 GGATGGTCAAGTCATCGATCCGTTCGGCGGCATGGACGATCTGAAAAACAAGGTGCTTCG 141530 ||| || || |||||||||||||| ||| | ||| || || |||||||| Sbjct 1208 GGACGGCACGGTGATCGATCCGTTCGGTGGCCGGCGCGACCTCGAAGCGCGTGTGCTTCG 1149 Query 141531 CCACGTCAATGCGGAAACCTTCAAGGAAGACCCGCTTCGCGTGCTGCGCGTTGCCCGTTT 141590 ||||||| | || | ||| || |||||| | ||| | |||||| | ||||| || Sbjct 1148 GCACGTCA---CCGATTCGTTCCGCGAGGACCCGGTGCGCATCCTGCGCCTGGCCCGCTT 1092 Query 141591 CCTTGCGCGGTGGAAGGATTTCGATGTCGCTCCGGAGACGTTCAAGCTGCTTCAGGAAAT 141650 | || ||| || | ||| |||| | ||| ||| || ||||| | | | || Sbjct 1091 CGCAGCCAGGTTCCAGCAGTTCTCGATCGCGCAGGAAACGCTCGAGCTGATGCGCGGGAT 1032 Query 141651 GGCGGCGACCGGCGAACTGAAGACCCTTCAGGCGGATCGCGTTTGGAAGGAA 141702 || | | ||||||| || | | || | |||| ||||| ||| ||||| Sbjct 1031 GGTGCAGGCCGGCGAGGTGGACGCGCTGGTGCCGGAACGCGTCTGGCAGGAA 980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622888095402360