Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3224 113 6e-20 seq2399 100 4e-16 >seq3224 Length=193136 Score = 113 bits (124), Expect = 6e-20 Identities = 684/1089 (63%), Gaps = 17/1089 (2%) Strand=Plus/Minus Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421 |||| ||| | || ||||||||||||| || || | | ||||| ||||||||||| Sbjct 111460 TCCTGATCGACAGTGAACTGAATGGGTGCAGAGGCTGCCATCGTACGAAGATAGTACATG 111401 Query 68422 CCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTT 68481 || || |||||||| || |||||||| || ||||| ||||| | |||| | | Sbjct 111400 CCCGTCTTCAGACCCAGTTTCCATCCGGCAAAGTGCATGCTTGTGATTTTGCCCATAGTA 111341 Query 68482 GGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCC 68541 || || | |||||| || | ||| ||| || || ||||| || |||| || || Sbjct 111340 GGCTCCTTGAGATGAATGTTGAGCGACTGAGACTGGTCAATGAATGCGCCTCGGTCAGCA 111281 Query 68542 GCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATA 68601 ||||||| | ||| || |||| | ||||||||| | ||||| ||| ||| || Sbjct 111280 GCCATTTGAACGATAGTCCTTTGGGAAATTTCCCATACTGTCTTGTAAAGAGCTTTAATG 111221 Query 68602 TCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTG 68658 || | || | | | | | ||||||| || || || || | ||| || ||||| Sbjct 111220 TCTGCGGGGATGTTTGGAATGTTTTGAACTGAACCGCCGTCAGCTATGATACGGTTCTTC 111161 Query 68659 ATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718 || | || ||| | || | | | | || || ||| || || ||| Sbjct 111160 ATGTTGTCGGACCAGAGGCCGAGGTCGACAAGATCCTTCAGAAGCCACGGGTTGACAATT 111101 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||| || | | |||| |||| || || || || |||||||| | | || Sbjct 111100 TGGAATTCACCCGCAAGGACTCGCCGAGAATAGATGTTTGACGTGTATGGTTCAAAACAT 111041 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 || || ||| ||||| ||| || ||||| ||||| || || || | || || Sbjct 111040 TCGTTGAATCCGAGAATCTGACTTGTGCTAGCAGTCGGCATGGGGGCAACAAGCAAGCTG 110981 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 || | | || || || || | | ||| || | |||||||||||| ||| Sbjct 110980 TTGCGCACGCCGTGCTTTGCAATCTCCTTTTTGAGCGAATCCCAATCCCAAAGGTCACTA 110921 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 ||| || ||||| | ||| || || | || || | | || || | || Sbjct 110920 GGTGTCACTTTCCACATATCATACTGCAAAACACCCTGCGAAACGGGGGAGCCTTCGTAC 110861 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 || || ||||| || || | |||| || ||| || || || |||| |||| Sbjct 110860 GTCTCGTAAGGACCCTCGACCTTGGCTATGTCGCAAGACGCGGTCAACGCGCCGTGATAA 110801 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATG 69077 |||||||||||||| | |||| | | |||| || || | || || || | | Sbjct 110800 ATTGTTTCGAAAATTTGTATATTCAACTGCTTG-GCCTCGGGCGAGTCAAACGGCAAGCG 110742 Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137 ||| || || ||||| || | || || || || | | || || | ||| | Sbjct 110741 CAAAGCAAGGAAAGCATCGGCAAGCCCTTGCACACCGACCGCAATTGGACGATGGCGGAA 110682 Query 69138 ATTTGAACTTTC--AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 ||| | |||| ||| || |||| |||||||| || ||| || || || || | | Sbjct 110681 ATT--ACTTTTCCGAGCCTCAGGAACAGGATAATGGTTGCCATCAATTATCTTGTTCAAA 110624 Query 69196 TTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-AATCGTCCATCTAT 69254 || || || | |||| || || | | ||| ||| ||| | ||| ||| | Sbjct 110623 TTGCGAACAAGAACTTGCGTAACTTCATGCAATTTACCAAAGTCATACTCG-CCACGAAC 110565 Query 69255 A--ACAAACATAT----TCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGA 69308 | | ||||||| || || | |||||||| || ||||| || || |||| | Sbjct 110564 AGGATCAACATATGTGGGCAAGGCAAGGGATGCTAGGTTGCAAACAGCAACTTCATCTGG 110505 Query 69309 ATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTG 69368 | ||| | || ||||| ||||| | ||| | | || || || ||||||| Sbjct 110504 TGCGGTATACTCGATGATCTCCGTACACAAGTTAGAGCTTCGAATCGTTCCGAGATTTTT 110445 Query 69369 CTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAAT 69428 ||| || |||||| || || |||||||||||||| || || ||| | || || || | Sbjct 110444 CTGGTTGCTCTTTCGATTGCATGCGTCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGT 110385 Query 69429 CTGAGATTC 69437 ||||| ||| Sbjct 110384 CTGAGCTTC 110376 >seq2399 Length=446898 Score = 100 bits (110), Expect = 4e-16 Identities = 222/330 (67%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 39842 TCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAAC 39901 || || |||| |||||||||| | || | ||||| | |||||| || || | Sbjct 271807 TCGATCGCATCAAAGAGATAAGTTCGTTGCTTTGGCTCTTTGATATATGTGTCGATGAGG 271866 Query 39902 AGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTT 39961 ||| || | || || |||||||| || ||| ||||| || ||||| || || | Sbjct 271867 AGAGAGTAGGTCTCAGAGTGGATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGG 271926 Query 39962 GCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCA 40021 ||||| | || || | ||| || || | || | | ||||||||||| |||||| Sbjct 271927 GCTTCTGGGATCTGGATCTCACCACTGAAGCGCTCGACAAGGTTTTCATTCACGATTCCA 271986 Query 40022 TCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATA---TTTTTCATCG-GGTGT 40077 || ||||| || || ||||| || ||| || || || || |||||| | || Sbjct 271987 TCGGAGGCGGCGAAGAAGGCCAAGACGTGTGAGATGAAGTAGCGTTCATCATCGTTGAGT 272046 Query 40078 CAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGA 40137 | | ||||||||| | || ||| || || | || | |||||||| ||||| || || Sbjct 272047 C-GCTGATTCCAGTCGTGGAGATCCTTGGACAAGTCGATCTCTTCAGCAGTCCAGAAGGA 272105 Query 40138 CGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 || || ||||| |||||||| | ||| || Sbjct 272106 TGCTTCGGCCTTCTTGTACATTTGCCAAAT 272135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686878910880840