Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2399 129 7e-25 seq2322 84.2 3e-11 >seq2399 Length=446898 Score = 129 bits (142), Expect = 7e-25 Identities = 343/517 (66%), Gaps = 8/517 (2%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || || || |||||||| |||||||| ||||| || | | |||||| ||||| Sbjct 271225 TAATCACCAACACGCTTCTCGAAGAAGTTCGTCTTACCGGCCAACGAAATGTTGTCCATG 271284 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||| ||||| || | ||||| ||| | || ||| || || || | Sbjct 271285 AAGTCGAATGGGTTGGTGGCGTTGTAAAATTTCTTGTTACC--AAGGGCCACAAGTAGTC 271342 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 || | || |||||||||||| | |||| || ||| ||||| || | ||| | Sbjct 271343 TGTCAGCAACGAACTCAATGTACTGGCACATGAGCTTAGAATTCATTCCAAGTAGGGCGC 271402 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 | || || || ||| | ||| ||||||| |||||||| ||||| | | |||||| | Sbjct 271403 AAGGTAGGGCATCCGTCAAGAATTCTTTCTCGATCTCAACTGCCTCGGTGATGATGGCCT 271462 Query 122609 GGATAGTTT-CGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCC 122667 ||| | ||| |||| | | ||| | | ||||| |||||| || Sbjct 271463 GGACGGCCGGCGGGCCTGGG-CGGTGACGAAGATGAGAAAAGAGGAGACAGGCAAAGTCG 271521 Query 122668 TGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGA 122727 |||||||||||| || || || || |||||||| |||||| || || ||||| ||| Sbjct 271522 GTGTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCAGGCATAAGA 271581 Query 122728 CCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 122787 || |||||||| ||||| |||| | ||| || || |||||| |||||||| || Sbjct 271582 CCACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATACCCTCGACG 271641 Query 122788 CACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCAT 122846 |||||| |||| || || | ||||| | | || ||| | | | | |||| || Sbjct 271642 GCCGCAAAGGCAACCAGCCGCTGAGCGAAAGTG-GATTCTTGGTCTTGGATCCATCGAAT 271700 Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTT 122883 ||||| | |||||||| ||| || || || ||| Sbjct 271701 GGCCCAGTCAGCCTTCTTACGAATGCAAGGAACTGTT 271737 >seq2322 Length=302684 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/227 (69%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || || || || || ||||||| ||| || || ||||| || ||| || |||||||| Sbjct 272173 GCGTCGATTTCGTCGATGAAGATAATGCAAGGGGTATTTTTTCGCGCGGTTGCAAAGAGA 272114 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGC 11747 || ||||| | | || |||||||||||||| ||||| || | | | || || | Sbjct 272113 TCACGAACGCGAGATGGGCCGACACCAACAAACATTTCCACGAATTCCGAACCGCTGA-C 272055 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 |||| | ||| || || ||||||||| || ||||| || || | ||||| || | Sbjct 272054 ACTGTA-GAAAGGAACGCCTGATTCACCGGCCGTGGCTTTTGCTAGCAATGTCTTACCGG 271996 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854 ||||||| |||| | | || || || || || ||||||||| Sbjct 271995 TACCTGGAGGTCCCGACAATATCGCACCACGAGGAATTTTGGCACCA 271949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628004672757600