Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2399 154 2e-32 seq3224 96.9 4e-15 seq944 96.9 4e-15 seq1437 89.7 6e-13 >seq2399 Length=446898 Score = 154 bits (170), Expect = 2e-32 Identities = 304/447 (68%), Gaps = 2/447 (0%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| ||| |||| || || ||||| Sbjct 271225 TAATCACCAACACGCTTCTCGAAGAAGTTCGTCTTACCGGCCAACGAAATGTTGTCCATG 271284 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-TTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || |||||||| | | ||| ||| || || | |||| || || | Sbjct 271285 AAGTCGAATGGGTTGGTGGCGTTGTAAAATTTCTTGTTA-CCAAGGGCCACAAGTAGTCT 271343 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | ||| |||||||||||| |||| || || ||||| || | ||| || Sbjct 271344 GTCAGCAACGAACTCAATGTACTGGCACATGAGCTTAGAATTCATTCCAAGTAGGGCGCA 271403 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || ||| | ||| | ||||| || || || || || | |||||| || Sbjct 271404 AGGTAGGGCATCCGTCAAGAATTCTTTCTCGATCTCAACTGCCTCGGTGATGATGGCCTG 271463 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTG 130026 | || | || ||| || | | || | | ||||| |||||| || Sbjct 271464 GACGGCCGGCGGGCCTGGGCGGTGACGAAGATGAGAAAAGAGGAGACAGGCAAAGTCGGT 271523 Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||||||||||||||| ||||| ||||||||||||||| || || ||||| ||||| Sbjct 271524 GTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCAGGCATAAGACC 271583 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| ||||||||||| | | || |||||| |||||| || ||||| || Sbjct 271584 ACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATACCCTCGACGGC 271643 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAA 130173 ||| || |||| || |||| ||| || Sbjct 271644 CGCAAAGGCAACCAGCCGCTGAGCGAA 271670 >seq3224 Length=193136 Score = 96.9 bits (106), Expect = 4e-15 Identities = 394/618 (64%), Gaps = 11/618 (2%) Strand=Plus/Minus Query 118947 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 ||||| || |||||||| ||||| | | || | | |||||| |||| || || ||| Sbjct 110250 TAGAGAGCCTCAAACTCATCACCGTAGACATCGGCCAACCCTGGCGCCTCATTAGGACAG 110191 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 || | | ||||| ||| || ||||||||| |||||||| | || || |||| || Sbjct 110190 AACAATGTCCATTCACCGTTCTGCTCAACCCGTTTCATGAACAAATCGGGAGTCCAAAGA 110131 Query 119067 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 119126 || ||| ||||| || | |||| || | || || || ||| | |||| | Sbjct 110130 GCAAGGAAAAGATCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTACGAAGATCCAGA 110071 Query 119127 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT------TGACCCCTTA 119180 || || | ||||| | |||||| ||||| || || | |||| || || |||| Sbjct 110070 AACTCGAAAATATCGGAGTGCCAAGGTTCAAGATAGATGGCGAAGGCACCTGGCCGCTTA 110011 Query 119181 CGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 | ||| || | || || | || ||| |||||| ||||||||||| |||| | Sbjct 110010 TTGCCACCT---TGATCGACGTATCGAGCGGTGTTGTTAAAGACACGAAGCATAGGAACG 109954 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 || |||| ||| |||||| || || ||| || | | || | || | || Sbjct 109953 ATCCCATTGGAGGAGCCATTCGTTCCTGCAATGTAGGAACCAGTCGCACGGATACGATGA 109894 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 | | | ||||||||| || || || || || | || || |||| | | Sbjct 109893 ACATTAAGACCAATACCACCAGCTGTTTTGGAAATCAGGGCACAGGTTTTGAGGGTATCA 109834 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 || || || ||||| || |||| | | |||||||| ||| | ||| || ||| Sbjct 109833 TAAATACCGTCGATGCTATCTTCCTTCATATCAATGAGGAAACAGGAAGCCATCTGTGGC 109774 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 119480 || || || || ||||| ||||| || | || || |||| | ||||||||| Sbjct 109773 TGTGGCGTCCCCGCATTGAAAAGAGTGGGAGAAGCATGAGTGAAAAATTTCTGGGACATC 109714 Query 119481 TTGTCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 | |||||||||| | | | || || || |||||||| || | | || || Sbjct 109713 AAATTATAGGTCTCCATCGTTTTCTCG-ATATCCTCGCCGTGAATGCCAACGGCAACACG 109655 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||||| |||||| Sbjct 109654 CATGATCATGTGTTGGGG 109637 >seq944 Length=8805 Score = 96.9 bits (106), Expect = 4e-15 Identities = 255/380 (67%), Gaps = 16/380 (4%) Strand=Plus/Plus Query 14056 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 14115 || || ||| || ||||| || || || || || ||| ||| || | || ||| || Sbjct 7499 GACCTGACGGTCGAAGCGGCCCGGCCGCAGCAGCGCGGGGTCGAGCACGTCGGGGCGATT 7558 Query 14116 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAA 14172 |||||||||| || | ||| ||| ||||| || ||||| ||||| || || Sbjct 7559 GGTCGCCGCGACGATGATGATCCCC---TCGTTCGCCTCGAAGCCGTCCATTTCGACCAG 7615 Query 14173 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAG--GCATACCACCCGCACTGCGT 14230 || || || | || || ||||| || || || || | || | | ||||||| ||| Sbjct 7616 CAGCTGGTTCAGCGTCTGCTCGCGCTCGTCGTT-GCCGTTGCCCAGC-CCCGCACCGCGG 7673 Query 14231 TGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATG--GTTGATTTTCACGGG 14288 ||| ||||||||||| || || |||||||| ||||| || | | || || || Sbjct 7674 TGCCGGCCGACGGCGTCGATCTCGTCGATGAAGACGATGCACGGCGCCGACTT--CTTGG 7731 Query 14289 CAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 14348 | ||| || || || ||||| | |||| || || || || ||||| ||||| || | Sbjct 7732 CCTGTTCGAACATGTCGCGCACGCGGCTGGCGCCCACGCCGACGAACATTTCCACGAAGT 7791 Query 14349 TGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGG 14407 | ||||| || | || || || ||| | |||||||| || || |||||||| Sbjct 7792 CCGAACCGGAA-ATGGTGAAAAACGGCACGCCCGCCTCACCCGCAATCGCGCGGGCGAGC 7850 Query 14408 AGGGTCTTCCCCGTCCCTGG 14427 || ||||| || || || || Sbjct 7851 AGCGTCTTGCCGGTACCGGG 7870 >seq1437 Length=11314 Score = 89.7 bits (98), Expect = 6e-13 Identities = 276/425 (65%), Gaps = 4/425 (1%) Strand=Plus/Minus Query 14005 GTGGACACCCAAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACG 14064 |||||| || |||| |||||| ||||| | || || |||| || || || Sbjct 9566 GTGGACGTTCAGGATCTGCTCGCGGCCGCGGATGTCCGGCAGCTGCACGTAGACCTGGCG 9507 Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124 || ||||| || ||||| || |||||| |||| ||||| || |||||| || || || Sbjct 9506 GTCGAAGCGGCCGGGGCGCAGCAGGGCGGCGTCCAGGATGTCCGGGCGGTTGGTGGCGGC 9447 Query 14125 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 14184 | || | | |||| | | | || ||||| |||||||| || | || |||| Sbjct 9446 CACCACGATCACGCCCAGGTTGGTCTCGAAGCCGTCCATCTCGACCAGCATCTGGTTGAG 9387 Query 14185 GGTTTGTTCGCGTTCATCATTCGCAGGCATACCA--CCCGCACTGCGTTGCTTACCGACG 14242 ||| || ||||| || || || | || ||| || || | || || ||||| Sbjct 9386 GGTCTGCTCGCGCTCGTCGTTGCC--GCCGCCCAGGCCGGCGCCACGCTGGCGGCCGACC 9329 Query 14243 GCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGATA 14302 ||||| || ||||||||||| | ||| || || || | ||| || || || Sbjct 9328 GCGTCGATCTCATCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCGTTCTCGAACATG 9269 Query 14303 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACAT 14362 || ||||| | || ||||| || || ||||||||||| || | || | | || Sbjct 9268 TCGCGCACGCGGGCCGCGCCGACGCCGACGAACATCTCCACGAAGTCGGAGCCCGAGATG 9209 Query 14363 TGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTC 14422 || ||| || || || | || || |||||| | ||| || || ||||| || ||| Sbjct 9208 CTGAAGAACGGCACCTTGGCCTCGCCGGCGATGCCCTTGGCCAGCAGCGTCTTGCCGGTC 9149 Query 14423 CCTGG 14427 || || Sbjct 9148 CCCGG 9144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618408290338360