Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2399 132 6e-26 seq944 93.3 5e-14 seq2322 86.0 7e-12 >seq2399 Length=446898 Score = 132 bits (146), Expect = 6e-26 Identities = 347/522 (66%), Gaps = 18/522 (3%) Strand=Plus/Minus Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTC 94790 ||||||||| || |||| ||||| || || ||||| || | | | ||| ||| | Sbjct 271737 AACAGTTCCTTGCATTCGTAAGAAGGCTGACTGGGCCAT----TCGATGGATCCAAGACC 271682 Query 94791 GCGT-TCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCT 94846 | ||| || ||| |||| || | || |||||| || |||||||| |||||| Sbjct 271681 AAGAATCCACTTTCGCTCAGCGGCTGGTTGCCTTTGCGGCCGTCGAGGGTATTTTCTTCA 271622 Query 94847 CTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906 ||| || ||| | |||| ||| | |||||||| ||||| ||||| || || || Sbjct 271621 GTGGCTCGTTCGCTTCCATTTTCTGGTTAAAGAAGCGTGGTCTTATGCCTGGCCTTACCT 271562 Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACT 94964 |||| || || || ||||||||||||||||| |||||| || ||||| | || Sbjct 271561 TCTCGAATGAACTGATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCT 271502 Query 94965 TTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGC 95024 |||| || | ||| ||| | | | | || | || | | || || Sbjct 271501 TTTCTCAT--CTTCGTCACCGCCCAGGCCCGCCGGCCGTCCAGGCCATCATCACCGAGGC 271444 Query 95025 CGTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAA 95084 |||||||| ||||||| |||| | ||||||||| || ||||| || | || ||||| Sbjct 271443 AGTTGAGATCGAGAAAGAATTCTTGACGGATGCCCTACCTTGCGCCCTACTTGGAATGAA 271384 Query 95085 TTCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGA-TTGTTGAAGCAGATCG 95143 |||| | |||| | || ||||||| || |||| ||| | ||| || | Sbjct 271383 TTCTAAGCTCATGTGCCAGTACATTGAGTTCGTTGCTGACAGACTACTTGTGGC---CCT 271327 Query 95144 GGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCT 95201 ||| | || ||| ||| ||| || ||||| ||||||||||| |||||| | Sbjct 271326 TGGTAACAAGAAATTTTACAACGCCACCAACCCATTCGACTTCATGGACAACATTTCGTT 271267 Query 95202 CGACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243 | ||| ||||| ||||||||||| ||| | ||||| || || Sbjct 271266 GGCCGGTAAGACGAACTTCTTCGAGAAGCGTGTTGGTGATTA 271225 >seq944 Length=8805 Score = 93.3 bits (102), Expect = 5e-14 Identities = 277/416 (67%), Gaps = 10/416 (2%) Strand=Plus/Plus Query 9517 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9576 || || ||| || ||||| || || || || |||||| || || | || |||||| Sbjct 7499 GACCTGACGGTCGAAGCGGCCCGGCCGCAGCAGCGCGGGGTCGAGCACGTCGGGGCGATT 7558 Query 9577 CGTCGCGGCGATGACAACAATACC-TGTTTCATTATCAAAACCATCCATCTCTGTCAAAA 9635 ||||| |||| || | || || | ||| || || || ||||| || || | Sbjct 7559 GGTCGCCGCGACGATGATGATCCCCTCGTTCGCC-TCGAAGCCGTCCATTTCGACCAGCA 7617 Query 9636 GTTGGTTAATAGTTTGTTCCCGTTCATCATTCGC-TGGCATACCACCAGCACTGCGTTGC 9694 | ||||| | || || || || || || || | | || | | || |||| ||| ||| Sbjct 7618 GCTGGTTCAGCGTCTGCTCGCGCTCGTCGTTGCCGTTGCCCAGCCCC-GCACCGCGGTGC 7676 Query 9695 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTT--GATTTTCGCGAGCGA 9752 || ||||| || ||||| || |||||||||||||| || || || | | || Sbjct 7677 CGGCCGACGGCGTCGATCTCGTCGATGAAGACGATGCACGGCGCCGACTT-CTTG-GCCT 7734 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 ||| || | || || || || |||||||||| || || ||||| ||||| |||| | Sbjct 7735 GTTCGAACATGTCGCGCACGCGGCTGGCGCCCACGCCGACGAACATTTCCACGAAGTCCG 7794 Query 9813 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 ||||| || | || || || || | ||||||||||| || |||||||| || Sbjct 7795 AACCGGAA-ATGGTGAAAAACGGCACGCCCGCCTCACCCGCAATCGCGCGGGCGAGCAGC 7853 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||||| || ||||| ||| || | || || || || || |||||| |||| Sbjct 7854 GTCTTGCCGGTACCGGGCGATCCGACCAGCAGCGCGCCCTTCGGGATCTTGCCGCC 7909 >seq2322 Length=302684 Score = 86.0 bits (94), Expect = 7e-12 Identities = 271/417 (65%), Gaps = 25/417 (6%) Strand=Plus/Minus Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585 ||| || || || ||||| | || || | ||||| | ||| | ||| || | || Sbjct 272354 ATCGAATCGGCCAGGACGCATCAGGGCTTTGTCAAGCACATCCGGCCTATTGGTACCAGC 272295 Query 9586 GATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGGTT 9642 || |||||||| || ||| ||| ||| ||||||||||| || | | ||| || Sbjct 272294 GAGGACAACAA---CTTGCTCAGACGTATTAAAGCCATCCATCTCCGTTAGGATTTGATT 272238 Query 9643 AATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC-------- 9694 | ||| |||||||||||| || | ||||| | | ||| | Sbjct 272237 CAAAGTACTTTCCCGTTCATCGTTACCG------CCACCGAAATTTTGTTTCGCTCTCGA 272184 Query 9695 -TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 || || | || || || || || ||||||| ||||| || ||||| || ||| Sbjct 272183 TTTACCAATAGCGTCGATTTCGTCGATGAAGATAATGCAAGGGGTATTTTTTCGCGCGGT 272124 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9812 | |||||||||| || || || | ||| |||||||||||||| ||||| || | | Sbjct 272123 TGCAAAGAGATCACGAACGCGAGATGGGCCGACACCAACAAACATTTCCACGAATTCCGA 272064 Query 9813 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | || | ||| || | ||| || || |||||||| || ||||| || || | Sbjct 272063 ACCGCTG-ACACTGTA-GAAAGGAACGCCTGATTCACCGGCCGTGGCTTTTGCTAGCAAT 272006 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 |||||||| |||||||| |||| | | ||||| || ||||| ||||| ||| Sbjct 272005 GTCTTACCGGTACCTGGAGGTCCCGACAATATCGCACCACGAGGAATTTTGGCACCA 271949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583235420864440