Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3224 150 2e-31 seq554 95.1 1e-14 >seq3224 Length=193136 Score = 150 bits (166), Expect = 2e-31 Identities = 395/599 (66%), Gaps = 4/599 (1%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || || |||||||||| || || || ||| | || || | || ||| || || Sbjct 110232 TCACCGTAGACATCGGCCAACCCTGGCGCCTCATTAGGACAGAACAATGTCCATTCACCG 110173 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | || ||||||| | |||||| | || || |||| || || ||| || || ||| Sbjct 110172 TTCTGCTCAACCCGTTTCATGAACAAATCGGGAGTCCAAAGAGCAAGGAAAAGATCACGG 110113 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 | || ||||| | || |||||| ||| || || ||||| || | || |||| | Sbjct 110112 GCTCTCACTTCCTCCTTTCCGTGGTTCTTACGAAGATCCAGAAACTCGAAAATATCGGAG 110053 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| || || |||||||||||||| | ||| ||||| ||| || || | |||| Sbjct 110052 TGCCAAGGTTCAAGATAGATGGCGAAGGCACCTGGCCGCTTATTGCCACCTTGATCGACG 109993 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || || || |||||||| || || || ||||| || ||||| || | || | ||| ||| Sbjct 109992 TATCGAGCGGTGTTGTTAAAGACACGAAGCATAGGAACGATCCCATTGGAGGAGCCATTC 109933 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCC 79663 || || || | ||| |||| || || | | || || | | || || || | Sbjct 109932 GTTCCTGCAATGTAGGAACCAGTCGCACGGATACGAT-GAACA-TTAAGACCAATACCAC 109875 Query 79664 CGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGT 79723 | | ||||| || | || || ||||| || || || || || ||||| | Sbjct 109874 CAGCTGTTTTGGAAATCAGGGCACAGGTTTTGAGGGTATCATAAATACCGTCGATGCTAT 109815 Query 79724 CGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGA 79783 | ||||||||| | | ||||| ||| | ||||||||| | ||| || || |||| Sbjct 109814 CTTCCTTCATATCAATGAGGAAACAGGAAGCCATCTGTGGCTGTGGCGTCCCCGCATTGA 109755 Query 79784 AGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGA 79843 | || || || | || || ||||| || || ||| ||||| || || |||||| | Sbjct 109754 AAAGAGTGGGAGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTCTCCATCG 109695 Query 79844 CGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGC 79902 | || || |||||||| ||||| || || || ||||||| | || |||||| Sbjct 109694 TTTTCTCGATATCCTCGCCGTGAATGCCAACGGCAACACGCATGATCATGTGTTGGGGC 109636 Score = 100 bits (110), Expect = 3e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || || | |||||||||||||||||| |||||| ||||||||| | |||||| || Sbjct 111418 GTACGAAGATAGTACATGCCCGTCTTCAGACCCAGTTTCCATCCGGCAAAGTGCATGCTT 111359 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGA-TGTTGAGCGACTGGGACTGGTCGAT 78308 | | ||| ||| | | || | || | || || ||||||||||||| |||||||| || Sbjct 111358 GTGATTTTGCCCATAGTAGGCTCCTTGA-GATGAATGTTGAGCGACTGAGACTGGTCAAT 111300 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 | | || || ||||| || ||||| | | || | | |||| | ||| ||||| | || Sbjct 111299 GAATGCGCCTCGGTCAGCAGCCATTTGAACGATAGTCCTTTGGGAAATTTCCCATACTGT 111240 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGATGT 78400 | ||||| || || | ||| | |||||| Sbjct 111239 CTTGTAAAGAGCTTTAATGTCTGCGGGGATGT 111208 >seq554 Length=8308 Score = 95.1 bits (104), Expect = 1e-14 Identities = 276/420 (66%), Gaps = 14/420 (3%) Strand=Plus/Minus Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442 |||||| |||||||||||||| ||||||| | |||| | || ||||| Sbjct 3984 CATGAACAGGTCCGGGATCCAGTTGGCCGTGTTCATGTCGTGCGTGCGGCGGCGGTCGTC 3925 Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502 ||| |||| |||||||| || || ||| ||||| |||||| |||||| || Sbjct 3924 GCCGGTGTTCTTGCGCAGCTCCAGGAACTCCTCCATGTCCAGGTGCCAGCTCTCCAGGTA 3865 Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562 | || || || ||||||||||||| |||||||||| || | ||| |||| ||| Sbjct 3864 GGTGCAGACCGCGCCCTTGCGCTTGC---CGCCCTGGTTCACCGCCACGGCGGTGTCGTT 3808 Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA--CGCCGTTCGTCCCGTTGATTCGT 79620 | || || | ||||| | ||| | |||| ||||||| || || ||||| | Sbjct 3807 CACCACCTTCAGGAACGGCACCACGCC--CTGCGATTCGCCGTTGGTGCCCTTGATGTGC 3750 Query 79621 GTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATG 79680 | || ||| || | | | |||| | | || | || || | ||||||| | Sbjct 3749 GAGCCCAGCGCGCGCACGCGGGTCCAGTCGTTGCCCAGCCCGCCCGCGAACTTGGACAGC 3690 Query 79681 TGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACC 79740 ||||| ||||||| || |||||||||||| || | ||||||| || | | Sbjct 3689 AGCGCGTTTTCCTTGATCGACTCGTAGATGCCGTC---CAGGTCGTCCGGCACCGTGGTG 3633 Query 79741 AGGAAGCAGCTCGACATCTG--TGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCG 79798 ||| ||||| |||| ||| || | | ||| ||| |||||| || ||||| |||| Sbjct 3632 AGGTAGCAGGAGGACAGCTGGCTGCGCAG--CGTGCCGCTGTTGAACAGCGTCGGGGTCG 3575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548500932314640