Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3224 168 7e-37 seq2399 118 1e-21 seq495 93.3 5e-14 seq3180 86.0 7e-12 >seq3224 Length=193136 Score = 168 bits (186), Expect = 7e-37 Identities = 367/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| || | || ||| ||| || | || || || || | || || || ||||| Sbjct 109700 GAGACCTATAATTTGATGTCCCAGAAATTTTTCACTCATGCTTCTCCCACTCTTTTCAAT 109759 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || || ||| || || |||||| | ||| ||||| | | |||||||| || Sbjct 109760 GCGGGGACGCCACAGCCACAGATGGCTTCCTGTTTCCTCATTGATATGAAGGAAGATAGC 109819 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 |||||||| || || || || ||||| ||||||| || ||||| | |||||| Sbjct 109820 ATCGACGGTATTTATGATACCCTCAAAACCTGTGCCCTGATTTCCAAAACAGCTGGTGGT 109879 Query 53423 ATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480 || ||| | | || || | ||| |||||||| || | || || ||||| | Sbjct 109880 ATTGGTCTTAA-TGTTC-ATCGTATCCGTGCGACTGGTTCCTACATTGCAGGAACGAATG 109937 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 || | || |||| ||||| |||||||| || ||||| |||||||| || || |||||| Sbjct 109938 GCTCCTCCAATGGGATCGTTCCTATGCTTCGTGTCTTTAACAACACCGCTCGATACGTCG 109997 Query 53541 ACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 | || ||||| ||||| | ||| | | ||||||||||| || || || |||||| || Sbjct 109998 ATCAAGGTGGCAATAAGCGGCCAGGTGCC-TTCGCCATCTATCTTGAACCTTGGCACTCC 110056 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 || ||| | |||||||| || || ||| ||| || || | || || || | |||| Sbjct 110057 GATATTTTCGAGTTTCTGGATCTTCGTAAGAACCACGGAAAGGAGGAAGTGAGAGCCCGT 110116 Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719 || || || ||||| |||| ||| || | |||||| || ||| ||| || ||| Sbjct 110117 GATCTTTTCCTTGCTCTTTGGACTCCCGATTTGTTCATGAAACGGGTTGAGCAGAACGGT 110176 Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAG 53779 || ||| || | || || || ||| || || | | |||||||||||| ||| Sbjct 110177 GAATGGACATTGTTCTGTCCTAATGAGGCGCCAGGGTTGGCCGATGTCTACGGTGATGAG 110236 Query 53780 TTT 53782 ||| Sbjct 110237 TTT 110239 >seq2399 Length=446898 Score = 118 bits (130), Expect = 1e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 |||| ||||||||| || | ||||||||||||||| ||||||||||| ||||| || ||| Sbjct 271546 ATCAGTTCATTCGAGAAGGTAAGGCCAGGCATAAGACCACGCTTCTTTAACCAGAAAATG 271605 Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903 | | ||| || ||||||||||| || || ||||| ||||||||| || || || || Sbjct 271606 GAAGCGAACGAGCCACTGAAGAAAATACCCTCGACGGCCGCAAAGGCAACCAGCCGCTGA 271665 Query 74904 GCGAA 74908 ||||| Sbjct 271666 GCGAA 271670 >seq495 Length=77767 Score = 93.3 bits (102), Expect = 5e-14 Identities = 199/291 (68%), Gaps = 6/291 (2%) Strand=Plus/Plus Query 152782 CCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTAGCGC 152841 || |||||||| ||||| |||| || ||||||||||| ||| |||| ||||| Sbjct 8399 CCTTTGATGTGACTACCGTCGTGATCTTGATCAGTCATGATCATGAGATGACCATAGCGA 8458 Query 152842 AGGTCACGTAGTGACCCGTAGA--CCTTTCCATGTTGAAGCCCGAGGATCTTTTTGAGGT 152899 ||| ||||| ||| ||||| | |||| || || || ||||||| ||||||| | Sbjct 8459 AGGCCACGT-GTG-TCCGTATATTCCTTCTTGTGCTGTAGGCCGAGGAAATTTTTGATAT 8516 Query 152900 TGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGGCT 152959 | || ||| | || | || | ||| | || | ||||| || || ||| | ||| Sbjct 8517 TTTGAATTTCTTGGTTTTTGGAAATCTGATCAACGGATGCATCACGCACGTTGAGTAGCT 8576 Query 152960 TTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAAC-GCTCAGACCGGCAATA 153018 |||| || || || || ||||| || | | | || ||||| |||| || || || Sbjct 8577 TTCCTCGCAGGGGGAAGACGCCAAAGAGATCGGGACCAACAACAGCTC-TTCCAGCCATT 8635 Query 153019 GCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTGA 153069 |||||| | || || || || || ||||| | ||| || ||||| | |||| Sbjct 8636 GCAAGGCCCTTGGCTGAATCTCCTTCGGTAAGAATCAGAGTACAATGGTGA 8686 >seq3180 Length=115279 Score = 86.0 bits (94), Expect = 7e-12 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 124712 CTCGTGGTTGAACAGAATGCCAGTACAC-GCAAACATCCCGTACGACTCGCGGTAGTTTT 124770 ||||||||||||||| ||||| | ||| | || || || || || |||||||| Sbjct 93914 CTCGTGGTTGAACAGGATGCC-GCTCACTCCGAAGATGCCATAGCTTTCACGGTAGTTCA 93972 Query 124771 TCGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGG 124830 |||||||| | || ||||||||| |||||| ||||| || || |||||||| || | Sbjct 93973 CAGTCATCCAGTGGGCATAGAGCTTGGCCACGCCGTAGGGACTGCGCGGGTAGAAAGGCG 94032 Query 124831 TGTTTTC-ATTTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGA 124889 || |||| | || || | | ||| | | || |||||||| || || | ||||||| Sbjct 94033 TGCTTTCGACTTGCGGCACG-GCCTGCACCAGACCGAACATCTCGGACGTGCTCGCCTGA 94091 Query 124890 TAGAA 124894 || || Sbjct 94092 TAAAA 94096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547192189263800