Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq549 95.1 3e-15 >seq549 Length=26442 Score = 95.1 bits (104), Expect = 3e-15 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCG 31313 |||||| | ||| ||||||||||||| |||||||||| | ||||| |||||||||||||| Sbjct 7480 TGGCTGGGGCGGCAGGATTCGAACCTGCGAATGCCGGTACCAAAAACCGGTGCCTTACCG 7539 Query 31314 CTTGGCGACG 31323 |||||||||| Sbjct 7540 CTTGGCGACG 7549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138192687310014