Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq204 161 3e-35 seq2984 82.4 2e-11 >seq204 Length=38477 Score = 161 bits (178), Expect = 3e-35 Identities = 235/330 (71%), Gaps = 4/330 (1%) Strand=Plus/Minus Query 38998 CCGTACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATC 39057 ||| | ||||||||||| ||| || | ||||||||| || | |||||| ||| Sbjct 25417 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 25358 Query 39058 ACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCT 39115 || | | ||| | | | || |||||||||||| | ||| ||||| || || |||| Sbjct 25357 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 25300 Query 39116 CAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCC 39175 | ||||||||||| |||||||| | || || ||| ||| || |||||||||||| Sbjct 25299 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 25240 Query 39176 CGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGC 39235 ||| | || || ||||||| || || | || || || || ||||||||| || Sbjct 25239 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 25180 Query 39236 CGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCA 39295 |||| | ||| |||||| |||||||||| | |||| ||||||||| ||||| |||| Sbjct 25179 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 25120 Query 39296 TCTGGTTGATCATGTCGATCTCGTACTCGA 39325 ||| ||| | |||||||| |||||| Sbjct 25119 TCTTCAGGATGGTCCCGATCTCGAACTCGA 25090 Score = 120 bits (132), Expect = 1e-22 Identities = 216/311 (69%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999 ||||||||| ||||||| |||||| | | ||| |||| |||| || |||||| | Sbjct 26439 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 26380 Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGC-- 38057 | | ||||| |||||||||| |||| || ||||| | | || ||| | | | | Sbjct 26379 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 26320 Query 38058 CCGGATGGCAGCCTCCGAGTAGCCTCGCT-CGCTCGCCCCCTTCTGGAAGTTCACGAACT 38116 ||| | ||| || | || || ||| ||| ||| | |||| || | | Sbjct 26319 CCGCCTTCT--CCTGCGCGATCCCATTCTTCGC-CGCGCCCGCCCGGAAAATCTCCCGGT 26263 Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176 || ||||| | |||||| ||||||||||||||| || || || || ||||| || | Sbjct 26262 GCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGC 26203 Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236 | || ||||| ||| ||||||||||||| | || | |||||| |||||||||| |||| Sbjct 26202 CCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGA 26143 Query 38237 GCCCGAAGGTC 38247 ||| ||||| Sbjct 26142 TTCCGTAGGTC 26132 >seq2984 Length=16327 Score = 82.4 bits (90), Expect = 2e-11 Identities = 230/349 (66%), Gaps = 8/349 (2%) Strand=Plus/Minus Query 37929 GGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAG 37988 ||| || | | | ||| ||| || |||| |||||| |||| || | ||||||| || Sbjct 11008 GGCGGCGAAGAATTCGTGCGGATAATGCGCCTTCAGCCACGCGGTCTGATAGGCGAGCAG 10949 Query 37989 TCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTC 38048 |||| ||||| | ||| ||||||||| |||| |||||||| ||| || ||| Sbjct 10948 CGCGTAGGCCGCGGCGTGGCTTTTGTTGAAGCCGTATCCGGCGAACTTGTCGATCAAGTC 10889 Query 38049 CCACACCGCCCGGATGGCAGCCTCCGAG---TAGCCTCGCTCGCTCGCCCCCTTCTGGAA 38105 ||| ||| | | | || ||| | | | ||||| ||| || | || Sbjct 10888 GAACAACGCATTGGCGCGATCCGCCGGGATCTGGTGATGCTCGG-CGCAGCCGGCGACAA 10830 Query 38106 -GTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGA 38164 | || || || | | ||| || | || |||||||||||| ||||| || | | Sbjct 10829 AGGTCGCGCGCTGCGCGTCCATTTCCGCCTGCACCTTCTTGCCCATCGCGCGGCGCAACA 10770 Query 38165 GGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCT 38224 | ||||| ||||| | || || ||||| | ||||||||||| | |||||| |||| Sbjct 10769 GATCGGCGCCGCCGAGCGAATAGCCCGCCAGCACCTGCGCCGCCTGCATCACCTGTTCCT 10710 Query 38225 GGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATC---TCGGCCAGCGG 38270 | |||| || || ||| |||| | |||||||| ||| |||||| Sbjct 10709 GATAGACGAAGATGCCGTAGGTTTCGGCCAGGATCGGTTCGAGCAGCGG 10661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159708597872742