Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028910.1 Length=55617 Score E Sequences producing significant alignments: (Bits) Value seq1231 396 9e-106 >seq1231 Length=29534 Score = 396 bits (438), Expect = 9e-106 Identities = 942/1396 (67%), Gaps = 102/1396 (7%) Strand=Plus/Minus Query 42302 AACCAGTGATGCTCGGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTAC 42357 |||| |||||||| |||||| |||| |||||||||| | |||| | |||| | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 42358 ATCGGCATCACGCA-CAAGTTCAACGATCTGATCCAGAGCTTGCACCGGATTCAGCGGTT 42416 ||||| | | || |||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 42417 CGGCCAAACCCATCCCTGCACAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGT 42476 | || | || || | | | | | |||||| ||||||| |||||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 42477 GCGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACAT 42536 ||| | | | | | ||| ||||| | ||| ||| ||| | ||| |||| || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 42537 CATTCATGAGTACGGACTTGACCCCGAAG-CGATCTCCGAGGCGCTGCAACGCTCCATCG 42595 ||| | || || || || | | || | || ||| | | |||| | ||||| |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGCG-CGCTCAAGCGCTCGATCG 3798 Query 42596 GGTGCGAGCGCATCGAAGCATCCGGCGAGGGGTGGGTGTTCGTCAACAACGACTGCGTAC 42655 | |||||| || | | ||||| || ||| | | | ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 42656 TCGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACCAGTATTCCGTTCT 42715 || | | | ||| || | ||||| || ||||| |||||| || |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 42716 CCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGC 42775 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 42776 ATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCCGGGC 42835 |||||| ||||||||||| | || || ||| | ||||| || || ||||| || | Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 42836 GGATCTACGCCTGC---CACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCG 42892 || || |||||| ||||| |||||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 42893 GCGTGCCCACCGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACG 42949 | ||||| ||||| |||||||||||| || ||| ||| ||| |||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACG 3444 Query 42950 GCTTCGACTACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGA 43009 ||||| | | | | ||||||||||||||||| ||||| || ||||| || |||||||||| Sbjct 3443 GCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGA 3384 Query 43010 CGTACCGGCTGGGCTGGT-CAGAGCAGTGC--AAAGACGCCACCAAGATGGGGGTCGGCT 43066 | ||||| ||| | || ||| | ||| || |||| ||| |||||||| |||| Sbjct 3383 CCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCA 3327 Query 43067 CCCCGGAATACGTTCTGCTGTTCCATAAACCGCAGACAGACAGGTCGAAGGGATACGCCG 43126 ||| |||||||| |||||| | | || ||||| | ||| | || || || |||| Sbjct 3326 GCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCG 3267 Query 43127 ACACACCCGTCGCCAAATCCAAGGACGA---CTACACCCGGGCACGTTGGCAGGTGGACG 43183 |||| || ||| |||| || | ||| ||||| || ||| || |||||||| |||| Sbjct 3266 ACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACG 3210 Query 43184 CGCACGCGTTCTGGCGATCGAGCGGAAACAGGTCACTGACAGTCGACGAGCT------TG 43237 | ||||| |||||||| || ||||| | | | || || || |||||| | Sbjct 3209 CCCACGCCTTCTGGCGCTCCAGCGGCGAGCGCCCGCTCACCGTGCGCGAGCTATGGGAGG 3150 Query 43238 CCG-----CGCTGCCACCAGA--CCAGTTGGCCTCACTGTTCACCAAGCACAGCC-TGAA 43289 || |||| || ||| | | ||||| | || | |||| || ||| Sbjct 3149 TCGAAGACCGCTTCCTCCATATGGCGACTGGCCAAA----TCGCGAAGCGGTTCCGCGAA 3094 Query 43290 G-GACG----------TCTACGACTACCAGTCACACGTCCGCATCGGTGAG--CAACTCG 43336 | |||| || || | || || | || ||| |||||| ||| || | || Sbjct 3093 GAGACGCGCGACCTCATCCACAGCCACAAGGCGCATGTCGACATCGGCGAGGCCATCGCG 3034 Query 43337 AA--GGTCG--------CGGT----GC--CCTGCCTGCTACGTTCATGGCCATCGC-CCC 43379 | || || |||| || |||||| || |||||||| ||||| ||| Sbjct 3033 GATCGGCCGGCCGGCTCCGGTCTGGGCAGCCTGCCGCGCACCTTCATGGCGATCGCGCCC 2974 Query 43380 GGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGAACCGGATGATCACCTTGAACG 43435 || | | |||| || |||||||| ||||| | |||||| || | |||| Sbjct 2973 GGCA-----GCCACCATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACG 2919 Query 43436 GGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGTGCCCCCTGCAGTTCGACATCG 43492 | |||||| |||||| || | | | ||| || |||||||| ||||||||||||| Sbjct 2918 GCGAGCAG---GTCCGCAAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCG 2862 Query 43493 TTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCG 43552 | |||||||||||| || | ||| | | |||||| |||||||||| |||||| ||| Sbjct 2861 TCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCG 2802 Query 43553 GGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACTT---GGTCGGCGCGGCCGTGGTGTCG 43609 | || |||||||||||| |||| || || ||| ||||| |||||| || || Sbjct 2801 GCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCGGTCGCCGCGGCGCCGGCAGCG 2745 Query 43610 AGCTGAATCCCGGCTA 43625 | || || |||| ||| Sbjct 2744 AACTCAACCCCGACTA 2729 Score = 264 bits (292), Expect = 4e-66 Identities = 287/375 (77%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 41596 TTCACGGCCGTCTCACTCGATGAGGCGAGCGTGCTGCGGTCTTTCGGGTCCAAGACCTAC 41655 ||||| |||||| || || ||||||||| | || || || |||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 41656 CAGTCGTTCCTAGAGCTGTTCGACGCGGTGCCGTACCGGTACGTCGCCACCGCCACGCCG 41715 ||| ||||||| ||| ||||| |||||||||||||| | ||||| |||||||| || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 41716 TCACCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACC 41775 || || ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 41776 GGGGCGGCGCTCACGCGTTGGTTCCAACGGGACT-CGACGAAGGCGAACAACCTCACCCT 41834 || |||||||| || | ||||| || || ||| ||||||| | | |||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCT 5535 Query 41835 CTACCCGCATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCA 41894 ||||||||| || ||||| |||||||||||||||||||| | ||||| | ||| |||| Sbjct 5534 CTACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCA 5475 Query 41895 ATCACCGGCCGACCTCGG--TCA-CGACGCCACCGGCTATGACCTTCCGCCGCTGGAGGT 41951 ||| ||||||||| ||| |||| |||||| || || || |||| || Sbjct 5474 GCGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 41952 GCTGTGGCATGAGGT 41966 || ||||| ||||| Sbjct 5417 GCGCTGGCACGAGGT 5403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177845448121038