Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028954.1 Length=36065 Score E Sequences producing significant alignments: (Bits) Value seq1247 113 1e-20 seq159 82.4 2e-11 >seq1247 Length=8953 Score = 113 bits (124), Expect = 1e-20 Identities = 176/249 (71%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 21988 TTCCAGAACGGCGGCAAGGTGGCGAACCTGCGCATTGCCACCACCCGCCGGTGGAAGTCC 22047 |||||||||||||||||||||| |||||||||||| || |||| | | |||||| Sbjct 8301 TTCCAGAACGGCGGCAAGGTGGTGAACCTGCGCATCGCGACCAGCGAAAGCTGGAAGGAT 8360 Query 22048 AAGAACACGGGCGAGGTGCAGGAAGAAACCGAATGGCATTCGGTCGTTGTGACCAATGAG 22107 || |||||||| ||||| ||||||||||||||||||||| | ||| || Sbjct 8361 CGCAATTCGGGCGAGCGCAAGGAAAAAACCGAATGGCATTCGGTCGCGATCTTCAACGAA 8420 Query 22108 GCCCTTGTCAACAACGTG---GAACGCTATCTGAAAAAAGGTTCCTATGTCCGAATTGAG 22164 | |||| | |||||| || |||| || || || || | ||| || ||| Sbjct 8421 G-GCTTGGC--GAACGTGGCCGAGCGCTTCCTACGCAAGGGGTCGAAGGTCTATATCGAG 8477 Query 22165 GGGCGCTTGCGGACCCGAAAATGGCAGGATCAGAACGGGACCGATCGCTACACAACCGAA 22224 || | ||| |||||| ||||||||||||||||| || || ||||| | ||||| Sbjct 8478 GGCCAGCTGCAGACCCGCAAATGGCAGGATCAGAATGGCCAGGACCGCTATTCGACCGAG 8537 Query 22225 ATCGTGGTG 22233 ||||| || Sbjct 8538 GTCGTGCTG 8546 >seq159 Length=45922 Score = 82.4 bits (90), Expect = 2e-11 Identities = 171/252 (68%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 21960 CTTGGGGCAGGACCCCGAGATTCGGACATTCCAGAACGGCGGCAAGGTGGCGAACCTGCG 22019 |||||| | ||||| ||| || | || ||||||||||||||||||| ||| |||| Sbjct 3814 CTTGGGTCGCGACCCTGAGTCGCGCTCGTTTCAGAACGGCGGCAAGGTGGTAAACTTGCG 3755 Query 22020 CATTGCCACCACCCGCCGGTGGAAGTCCAAGAACACGGGCGAGGTGCAGGAAGAAACCGA 22079 ||| || |||| | | |||||| || |||||||| ||||| | ||||| Sbjct 3754 CATCGCGACCAGCGAAAGCTGGAAGGATCGCAATTCGGGCGAGCGCAAGGAAAAGACCGA 3695 Query 22080 ATGGCATTCGGTCGTTGTGACCAATGAGGCCCTTGTCAACAACGTG---GAACGCTATCT 22136 |||||||||||||| | ||| || | |||| | || ||| || || | || Sbjct 3694 ATGGCATTCGGTCGCGATATTCAACGAAG-GCTTGGC--GAATGTGGCCGAGCGGTTCCT 3638 Query 22137 GAAAAAAGGTTCCTATGTCCGAATTGAGGGGCGCTTGCGGACCCGAAAATGGCAGGATCA 22196 | || || || | ||| || ||||| | | | |||||| ||||||||||| || Sbjct 3637 GCGCAAGGGGTCGAAGGTCTATATCGAGGGCCAGCTACAGACCCGGAAATGGCAGGACCA 3578 Query 22197 GAACGGGACCGA 22208 | ||| ||||| Sbjct 3577 GTCCGGCACCGA 3566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115281634420494