Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq204 170 6e-38 seq2984 91.5 5e-14 >seq204 Length=38477 Score = 170 bits (188), Expect = 6e-38 Identities = 238/332 (72%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 39429 TGCCGTACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGA 39488 ||||| | ||||||||||| ||| |||| ||||||||| || | |||||| || Sbjct 25419 TGCCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGA 25360 Query 39489 TCACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCG 39546 | || | | ||| | | | || |||||||||||| | ||| ||||| || ||||| Sbjct 25359 TGACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCG 25302 Query 39547 CTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGAT 39606 ||| ||||||||||| |||||||| | || || ||| ||| || ||||||||||| Sbjct 25301 CTCCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGAT 25242 Query 39607 CCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACAC 39666 | ||| | || || ||||||| || || | || ||||| || ||||||||| Sbjct 25241 CTTGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCA 25182 Query 39667 ACCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCC 39726 ||||| | ||| |||||| |||||||||| | |||| ||||||||| ||||| || Sbjct 25181 GCCGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCC 25122 Query 39727 CATCTGGTTGATCATGTCGATCTCGTAGTCGA 39758 ||||| ||| | |||||||| | |||| Sbjct 25121 CATCTTCAGGATGGTCCCGATCTCGAACTCGA 25090 Score = 114 bits (126), Expect = 4e-21 Identities = 216/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 38373 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 38432 ||||||||| ||||||| |||||| | | ||| |||| |||| || |||||| | Sbjct 26439 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 26380 Query 38433 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGC-- 38490 | | ||||| |||||||||| |||| || ||||| | | || ||| | | | | Sbjct 26379 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 26320 Query 38491 CCGGATGG--CAGCGTCCGAGTAGCCTCGCTCGCTTGCTCCCTTCTGGAAGTTCACGAAC 38548 ||| | | ||| ||| | | | |||| || ||| | |||| || | Sbjct 26319 CCGCCTTCTCCTGCG--CGA-TCCCATTCTTCGCC-GCGCCCGCCCGGAAAATCTCCCGG 26264 Query 38549 TCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGA 38608 | || ||||| | |||||| ||||||||||||||| || || || || ||||| || Sbjct 26263 TGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCG 26204 Query 38609 CCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATG 38668 || || ||||| ||| ||||||||||||| | || | |||||| |||||||||| ||| Sbjct 26203 CCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATG 26144 Query 38669 AGCCCGAAGGTC 38680 | ||| ||||| Sbjct 26143 ATTCCGTAGGTC 26132 >seq2984 Length=16327 Score = 91.5 bits (100), Expect = 5e-14 Identities = 246/370 (66%), Gaps = 36/370 (10%) Strand=Plus/Minus Query 38572 CTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGAT 38631 |||||||||||| ||||| || | || ||||| ||||| | || || ||||| | Sbjct 10795 CTTCTTGCCCATCGCGCGGCGCAACAGATCGGCGCCGCCGAGCGAATAGCCCGCCAGCAC 10736 Query 38632 CTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGAT 38691 ||||||||||| | |||||| ||||| |||| || || ||| |||| | ||||||| Sbjct 10735 CTGCGCCGCCTGCATCACCTGTTCCTGATAGACGAAGATGCCGTAGGTTTCGGCCAGGAT 10676 Query 38692 C---TCGGCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCTCCTGC-TGCCCGT 38747 | ||| ||||| || | |||| | |||| ||| | ||||| | Sbjct 10675 CGGTTCGAGCAGCG-------------GGTGCGGATATTC--GATCGCCTCCGTGCCC-T 10632 Query 38748 TCTTGCGGAGGGCGTAGTTCGTG-TGCGAGCCCATGCCCATCGGACCCGGACGGTACAGC 38806 |||||| || || || || | || || ||||||| ||||| ||||| ||| Sbjct 10631 GTTTGCGGCGGCCGAAGGACGGGATG-------TTGTCCATCGGGCCCGGGCGGTAGAGC 10579 Query 38807 GCCACGACGGCGGAGATGTCCTCGAA-CTGGTCCGGCTTCAGCAGGCGGAGCAGGGAG-- 38863 | |||| ||| |||||| |||| ||||| || | | |||||| ||| | | Sbjct 10578 GAGACGAGCGCGACGATGTCGCCGAAGTTGGTCGGG---CGGACGGCGGA-CAGCGTGCG 10523 Query 38864 -CGCATCGCGCCGCCGTCGAGCTGGAACACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTC 38922 |||||| | | || ||||||||||| | |||||||||| | ||||||| | Sbjct 10522 CCGCATCCCTTCCGATTCCAGCTGGAACACGCCAACCGTGTCGCCCTTCTGCAGCAGCGC 10463 Query 38923 GTACGTCGCG 38932 |||| |||| Sbjct 10462 GTACACCGCG 10453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160233376179150