Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq1137 123 8e-24 >seq1137 Length=21002 Score = 123 bits (136), Expect = 8e-24 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 18116 CGGCAATCGGGTCAATGAGATCGCCGAGATCACCTCCGGCTTGAAGTCGCTCGCCAGAGA 18175 ||||||||| || | || ||| | || |||| | ||| ||||| |||| |||| || Sbjct 14908 CGGCAATCGCGTGCAGGAAATCTCGGAAATCAGCCGCGGTCTGAAGACGCTGGCCAAGGA 14967 Query 18176 GCTCGATATCGCCGTCGTTTTGCTGTCGCAGCTTAATCGAGCAGTCGAG-AGCAGAGAGG 18234 || | || |||| | |||||||||||| | || || || ||| ||| | |||| Sbjct 14968 TCTGCACGTCCCCGTGCTCGCGCTGTCGCAGCTCAGCCGTGCGGTGGAGCAGC-GCGAGG 15026 Query 18235 ATAAGCGACCTCTTCTCTCAGACCTTCGCGATTCCGGTGCGATCGAGCAGGACGCCGACA 18294 | ||||| || | || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct 15027 ACAAGCGCCCGCAGCTGTCCGACCTTCGCGAATCCGGCTCGATCGAGCAGGACGCCGACA 15086 Query 18295 TGATCGCGTTCTTGTTCCGTGA 18316 || || |||| ||||||| || Sbjct 15087 TGGTCTGGTTCGTGTTCCGCGA 15108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162518081732658