Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq3158 93.3 3e-14 >seq3158 Length=82937 Score = 93.3 bits (102), Expect = 3e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || ||||||||| |||| || || || || | || ||||| ||||| ||| | || Sbjct 52271 GATAAAGAAGGTATTCCACCAGATCAACAGCGACTCATCTTTGCTGGAAAGCAACTCGAA 52330 Query 27943 GACGAACGCA-GCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 || | || | |||| |||||||||||||| || || || |||||| ||||||||||||| Sbjct 52331 GATGGCCGTACGCTT-TCCGATTACAACATTCAGAAGGAAAGCACTCTGCATTTGGTTTT 52389 Query 28002 GCGTTTGCGTGGCGG 28016 | | |||||||| || Sbjct 52390 GAGATTGCGTGGTGG 52404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355847302648887