Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3158 188 2e-42 seq599 120 7e-22 seq3102 104 5e-17 >seq3158 Length=82937 Score = 188 bits (208), Expect = 2e-42 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||||||||||||||| || ||||| |||||||||||||||| ||| || Sbjct 51540 CGAAGACGAAGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTG 51481 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| |||||||| | ||||| ||||| ||||||| || Sbjct 51480 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGAATGCCC 51421 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||| ||||| |||||| || |||||||| ||||| |||||||| || Sbjct 51420 TCCTTATCCTGAATCTTGGTTTTCACATTATCGATGGTATCAGAAGACTCAACCTCTAGG 51361 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| |||||||| || || ||||| || Sbjct 51360 GTGATGGTCTTTCCTGTCAGGGTCTTGAC 51332 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || || ||||| |||||||| ||||| || || | || |||| |||||| Sbjct 51759 AGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCT 51700 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || ||||| |||||||| | || || ||||| || |||| ||| |||||||| Sbjct 51699 TCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 51640 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||| ||||| || || ||||| ||| |||||| || | ||||||||| Sbjct 51639 TGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTC 51580 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | || || || || | |||||| Sbjct 51579 TTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || || ||||| |||||||| ||||| || || | || |||| |||||| Sbjct 52161 AGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCT 52102 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || ||||| |||||||| | || || ||||| || |||| ||| |||||||| Sbjct 52101 TCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 52042 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||| ||||| || || ||||| ||| |||||| || | ||||||||| Sbjct 52041 TGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTC 51982 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | || || || || | |||||| Sbjct 51981 TTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 Score = 141 bits (156), Expect = 2e-28 Identities = 161/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||| |||||||| |||||||| || | || || | || || Sbjct 51227 AGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCC 51168 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | |||||| ||||| ||||||| || ||||| ||| Sbjct 51167 TCGAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCC 51108 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || || ||||| || || ||| || |||||||||||||| Sbjct 51107 TGGATCTTGGTCTTAACATTGTCGATAGTATC---GCTAGACTCCACCTCGAGAGTGATG 51051 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| || | ||||| || || | |||||| Sbjct 51050 GTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCAT 51016 Score = 113 bits (124), Expect = 1e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||||||||||||||| || ||||| |||||||||||||||| ||| || Sbjct 51942 CGAAGACGAAGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTG 51883 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTC 211000 | || || || ||||||||||| |||||||| | |||||| ||||| Sbjct 51882 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTC 51836 >seq599 Length=174198 Score = 120 bits (132), Expect = 7e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| |||||||| || |||||||||||||||| ||||| | || ||| Sbjct 69523 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCCGAGAGGGTGCGGCCGTCT 69582 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||| ||||| |||||||| || ||||| ||||| || || | || |||||||| Sbjct 69583 TCGAGCTGTTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCCTCCTTGTC 69641 >seq3102 Length=369104 Score = 104 bits (114), Expect = 5e-17 Identities = 135/183 (74%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 ||||||||||||||||| | ||| || | || ||||| |||||||| || || || || Sbjct 110036 TTTTGGATGTTATAATCGCTCAA-AGTACGACCGTCTTCGAGCTGCTTTCCGGCAAAAAT 110094 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 | || || ||||| || || | || ||||| ||||||||||| |||||| || || Sbjct 110095 CAATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGCTTTTCACATTGTC 110154 Query 211046 GATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||| ||||| ||| || ||||| || ||||| ||||| || || || ||||| || Sbjct 110155 GATTGTGTC---GCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 110211 Query 211103 AAA 211105 || Sbjct 110212 GAA 110214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159100301458565