Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3355 87.8 1e-12 >seq3355 Length=30814 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || || ||||||| |||||| || | ||||||||||||||| || ||||| || || Sbjct 8640 TGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGAAG 8699 Query 29786 ATGTC--CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACT 29843 ||||| | ||| | |||||| ||||||||||| |||| ||||| ||||| |||| Sbjct 8700 ATGTCGGCACTG--CGCTGGTACAGCTGGCACGACAGCTTGCCGTCCGCGACGTAGAACT 8757 Query 29844 GACACATGGCATGGCACGGAGGAAGGGCCAT 29874 | | | || ||||| || | || ||||| Sbjct 8758 GGAAGAACGCGTGGCAGGGCGCCAGCGCCAT 8788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406145968653166