Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq1231 316 7e-82 seq1148 161 3e-35 seq1137 127 7e-25 >seq1231 Length=29534 Score = 316 bits (350), Expect = 7e-82 Identities = 588/852 (69%), Gaps = 16/852 (2%) Strand=Plus/Minus Query 1154 CCGGTGATCGCAGGCAGCGGCTGCAACTTCCAGCGCCACTGCTCGTGGGCCATCTACCTG 1213 |||||||| ||||||||| |||| | |||||||||||| | ||| | | | | Sbjct 4092 CCGGTGATGCTGGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGTC 4033 Query 1214 GGCATCGGCTTCAAGTTCAACGACTTCATCCAGTCCATTCACCGCCTGCACCGATTCCTG 1273 ||| | ||||||||||||||||||||||||||| | || ||||| || || || |||| | Sbjct 4032 GGCGTAGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAG 3973 Query 1274 CAGACCGGCCGCGTGCGCATCGACCTGATCTATACCGAGGCCGAGCGCGACATCCGCCGC 1333 ||| | || || ||||| | ||| | |||| | ||||| || || ||| Sbjct 3972 CAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGC 3913 Query 1334 CAACTCGAACGGAAGTGGCAGCAGCACAACACCATGGTTCAGCGCATGACCGAGATCATC 1393 | || | ||||||| || ||| | || |||||| ||||||||||| Sbjct 3912 GACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATC 3853 Query 1394 AAGCAGTACGGCCTGTC-CGTGGC--CGCCAT-GGCACAGACCCTCACCCGCTCCATGGG 1449 | || |||||| | || | |||| | ||| | |||| ||||| || || Sbjct 3852 CGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGCGCG----CTCAAGCGCTCGATCGG 3797 Query 1450 CGTGGAGCGCGTCGAGATCAAGGGCAAGGACTACACCATCGTCAACAACGACACCGTGCT 1509 ||| ||||| ||| ||| ||| | | || || | | |||||||| ||| Sbjct 3796 CGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGA 3737 Query 1510 CGAAACCCGCCGCATGGA--AAGCAACAGCGTCGGCTTGACCATCACCAGCATCCCCTTC 1567 || | ||| |||| ||| | | | ||| | ||| | ||||| |||||| ||| Sbjct 3736 TGAGGCTGCCCGGCTGGACGAAGGATCGG--TCGACCTGATCGTCACCTCCATCCCGTTC 3679 Query 1568 AGCACCCAGTACGAGTACTCGCCGAACTACGCCGACTTCGGCCACACCGACGACAACGCG 1627 |||| ||| ||||||||| |||||| |||| ||||||||||||||| ||||| ||| | Sbjct 3678 AGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGG 3619 Query 1628 CACTTCTTCGAGCAGATGGACTATCTGATCCCGGAACTGCTGCGCGTGACCATCCCCGGG 1687 || ||||||| ||||||||| |||||| ||| | ||||| || | | | | ||||| Sbjct 3618 CATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCG-CTGGCGCCGGG 3560 Query 1688 C-GTCTGGCCTGCATCCACGTGAAGGATCGCATCATTCCCGGCGGAATGACCGGCCTTGG 1746 | | || |||||||||||||||||||| || ||| | ||| | | |||||||| || Sbjct 3559 CCGGCTCGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGG 3500 Query 1747 CTTCCAGACCGTCTACCCCTTCCACATGGAAGTGACTCGAGC-CTTCGTCAAGCATGGCT 1805 | | ||||||| | || |||||| ||||| |||||| || | || |||| Sbjct 3499 TGTGCCGACCGTCAATCCGTTCCAC-GCCAAGTGCATCGAGCACTATATGCGCCACGGCT 3441 Query 1806 GGGCCTATATGGGCATGAAGACCATCGTCACCGACGTGGTTCGCGAGAACGCCCAGACCT 1865 | |||||||||| ||| ||||||||||||| || ||||||||| |||||||| Sbjct 3440 TCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCT 3381 Query 1866 ACCGCCTTTCGTGGACGGAGCAGTGCAAGGACGGCACCAAGATGGGTGTCGGCATGCCCG 1925 ||||||| |||| | ||| | ||||||||||| |||||||| ||||| |||| Sbjct 3380 ACCGCCTGTCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCG 3321 Query 1926 AGTACTTGCTGATCTTCCGCAAGCCGCCCACCGACAACTCCAACGCCTACGGCGACGTGC 1985 | ||| ||||| | | |||||||||| | |||| ||| || || | |||| || Sbjct 3320 AATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGC 3261 Query 1986 CGGTGGTCAAGG 1997 |||| ||||| Sbjct 3260 CGGTCACCAAGG 3249 Score = 136 bits (150), Expect = 1e-27 Identities = 204/290 (70%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 559 GTACCGGTACGTGGCCACTGCCACGCCAAGCCCGAACGAATACATCGAGCTACTGGCTTA 618 |||||| | || || || ||||| || || ||| |||| ||||| | ||| Sbjct 5681 GTACCGATTTGTCGCGACCGCCACCCCCTCGCCCAACCGCTACAAGGAGCTGATCCATTA 5622 Query 619 CTCGGCCTTCCTCGGCGTGATGGATGTCGGCCAGGCCAAGACCAGGTTCTTCAAACGCAA 678 | | | ||||||||||||||||| |||||| || ||| | |||||| | ||||| Sbjct 5621 CGCCGGTTTCCTCGGCGTGATGGACACCGGCCAAGCGCTCACCCGCTTCTTCCAGCGCAA 5562 Query 679 CTCTGAGAAGGCCGACCAACTCACCATCCATGCCCACAAAGAGGGCGAGTTCTGGATGTG 738 | |||||||| | | | |||||| || | | ||||| || ||||||||| |||| Sbjct 5561 CAGCGAGAAGGCGGGCGATCTCACCCTCTACCCGCACAAGGAACAAGAGTTCTGGCTGTG 5502 Query 739 GGTGGCGTCCTGGGCGATCTTCGTTCAGCGCCCCAGCGACCTCGGGTTCAGCGACGAAGG 798 | || |||||| | ||| | |||||||| ||||||||||| ||||| ||||| || Sbjct 5501 GCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCGAGCGACCTCGGATTCAGTGACGACGG 5442 Query 799 CTACGCGCTACCGGAACTGGACATCCGCTGGCACGAAGTACCGTCCGACC 848 ||||| || || | || | | ||||||||||| || | ||| |||| Sbjct 5441 CTACGATCTGCCCGCGCTCACCGTGCGCTGGCACGAGGTCCAGTCTGACC 5392 Score = 123 bits (136), Expect = 8e-24 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 2315 CACCCGGACGTATGGACCGACGTCGCCCGCATGCGGACGCTCAACGCCCAGCAGTACAGC 2374 || || ||||| ||| |||| ||| || |||| ||||||||||| | ||||| | || Sbjct 2964 CATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGTCCGC 2905 Query 2375 AAGGGCCAGGAAATGCACCTGTGCCCGCTGCAGTTCGACATCGTCGACCGGGCCATCGTG 2434 |||||| || | |||| | ||||| || ||||||||||||||||||||| |||| | Sbjct 2904 AAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAG 2845 Query 2435 CAGTACTCCATGGAAGGAGACCTGGTCTTCGATCCCTTCGGCGGGATCATGACCGTCCCG 2494 | ||||| ||| || || ||||| |||||||| ||| |||| || ||||| ||| Sbjct 2844 CGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCG 2785 Query 2495 TACTGCGCGC 2504 ||||||| Sbjct 2784 --ATGCGCGC 2777 >seq1148 Length=21331 Score = 161 bits (178), Expect = 3e-35 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046 ||| || || ||||| |||||||| ||| ||||||||| | | || || |||| || Sbjct 11773 GCCATTCCGCTGCTTGCTGATGATCACCTCGGCCACGCCGGGCTCCTTGGAGTCCTTGTT 11832 Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106 ||| ||||| ||||| | ||||||||| |||||||||||||||||||| || || || Sbjct 11833 GTAGTAGTCGTCGCGGTAGATGAACATGATGACGTCGGCGTCCTGCTCGATGGCGCCCGA 11892 Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAG 34166 ||||||||||| ||||||||| ||||||| | ||| ||||| | ||| || Sbjct 11893 TTCGCGCAGGTCGCTCATCATCGGGCGCTTGTCGGTGCGCGACTCCACGCCGCGTGACAG 11952 Query 34167 CTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 |||||||||| ||||||| ||| || || ||| ||||||| Sbjct 11953 CTGCGACAGCGCGATCACCGGGCAGCCCAGTTCCTTGGCCAG 11994 >seq1137 Length=21002 Score = 127 bits (140), Expect = 7e-25 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113 || || ||| |||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct 15111 TCTTCGCGGAACACGAACCAGACCATGTCGGCGTCCTGCTCGATCGAGCCGGATTCGCGA 15052 Query 34114 AGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGAC 34173 ||||| |||| | ||| ||||||| | |||||||||| | ||| ||||||||||| Sbjct 15051 AGGTCGGACAGCTGCGGGCGCTTGTCCTCGCGCTGCTCCACCGCACGGCTGAGCTGCGAC 14992 Query 34174 AGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 ||| ||| |||||||| || ||| ||||||| Sbjct 14991 AGCGCGAGCACGGGGACGTGCAGATCCTTGGCCAG 14957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160457366919690