Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_030943.1 Length=54990 Score E Sequences producing significant alignments: (Bits) Value seq234 87.8 6e-13 >seq234 Length=15970 Score = 87.8 bits (96), Expect = 6e-13 Identities = 154/218 (71%), Gaps = 15/218 (7%) Strand=Plus/Plus Query 3605 CGGATCAACTCTCCCGGCGGCGACGTCTACGACGCGATCGCCATCACCAACGC----GCT 3660 ||||||||||| ||||||||| ||||| || | | || ||| |||||| || Sbjct 8120 CGGATCAACTCGCCCGGCGGCTACGTCATGGAAGGTCTGGCGATCTTCAACGCCTTTGCG 8179 Query 3661 GCG-CAACCACGACGCGACGA----TCACCGTCCAGGTCGACGGCCTCGCCGCGTCGGCG 3715 ||| | | || || | ||| ||||| | || |||||||||||||||| || | Sbjct 8180 GCGGCGAAGGCGGCGGGCCGAAAGGTCACCATTCACATCGACGGCCTCGCCGCTTCCATG 8239 Query 3716 GCGAGCTTCATCGCGATGGCCGGCGACGAGGTGGTGATGTGCCG-CAACACCGAGATGAT 3774 ||| | ||||||| ||||| ||||||||| | | ||| |||| |||| || |||||| Sbjct 8240 GCGTCCGTCATCGCCATGGCAGGCGACGAGATCATCATG-GCCGACAACGCCCTGATGAT 8298 Query 3775 GATCCACGACGCCCGCGGATTCTG--CATCGGCAACGC 3810 ||| ||| | ||| || | || ||||||| |||| Sbjct 8299 GATTCACAA--TCCGTGGGATGTGGCCATCGGCGACGC 8334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175839131059344