Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq3355 170 3e-37 seq372 147 3e-30 >seq3355 Length=30814 Score = 170 bits (188), Expect = 3e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602 |||| ||||| ||||| |||||||||||| | ||||||| |||||||||||| ||| Sbjct 9157 AAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGAC 9098 Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662 |||| ||| |||||||| ||||||||||| || ||||| ||||| || ||||| ||| Sbjct 9097 CTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCAC 9038 Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTC 202722 |||||||||||||||||| | || | | ||| || | ||| ||| ||| || Sbjct 9037 GAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTG 8978 Query 202723 ACTATCTGGGACGAATGGGCGCGGGATGA 202751 || |||||||||||||||||||| || || Sbjct 8977 ACCATCTGGGACGAATGGGCGCGCGAGGA 8949 Score = 131 bits (144), Expect = 3e-25 Identities = 195/272 (72%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || ||||| ||| |||| |||||||| ||||| ||||| | ||||||||||| |||||| Sbjct 8734 CTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATC 8675 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409 ||| || || |||| || | ||| | || |||||| | || ||| || || || Sbjct 8674 GCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGAC 8615 Query 203410 TTCGTCTGGACAGGCGGTGA--TACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTC 203467 ||| ||||||| ||||| || |||||| || |||||| | ||||||| | Sbjct 8614 TTCATCTGGACCGGCGGCGACTGCCACATC--TACAGCAACCACCACGAGCAGGTGGAAC 8557 Query 203468 TGCAGTTAACTCGTGACCCGCACCCATTACCGCGT-CTGAAATTCAAACGTAAGCCCGAG 203526 ||||| | | || | || || || |||| ||| ||| | |||| || ||||| | | Sbjct 8556 TGCAGCTCTCCCGCCAGCCCCATCC-CTACCCCGTGCTGGACATCAAGCGCAAGCCGGCG 8498 Query 203527 TCTATCTTCGACTACCAGTTCGAAGACTTTGA 203558 || ||||||||||||| || ||| ||||| || Sbjct 8497 TCGATCTTCGACTACCGGTACGAGGACTTCGA 8466 >seq372 Length=11520 Score = 147 bits (162), Expect = 3e-30 Identities = 186/253 (74%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 202492 ATGCGCCAGTATCTCCAACTGATGGAATCCGTCCTCTCATTCGGTCAT-GAAAAGAAAGA 202550 |||||||| |||||| | || |||| ||| ||| || ||| || || ||| || Sbjct 9467 ATGCGCCAATATCTCGACCTCATGGCCCGCGTGCTCGAAT-CGGGCAGCGAGCAGATGGA 9525 Query 202551 CCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACCGA 202610 ||| |||||||| ||||||| | | | ||||| |||||||||||| || ||| |||| Sbjct 9526 CCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCCGA 9585 Query 202611 AGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTGCT 202670 |||||||| || | ||||| || || | ||||| || || ||||| |||| |||| Sbjct 9586 GGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTGCT 9645 Query 202671 GTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATCTG 202730 |||||||||| || ||||||||| | | | ||| | ||| | ||||| ||||| Sbjct 9646 GTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATCTG 9705 Query 202731 GGACGAATGGGCG 202743 ||||||||||||| Sbjct 9706 GGACGAATGGGCG 9718 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 203305 TATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCGTATGCTTTA 203364 || |||||| ||||| ||||| | ||||||||||| ||||||||| ||||| | Sbjct 9956 TACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCTATGCGCTG 10015 Query 203365 CTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAGTTCGTCTGGACAGGC 203424 || || | ||| | || ||||| | ||| | | | |||||| ||||||| ||| Sbjct 10016 CTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTCATCTGGACCGGC 10075 Query 203425 GGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCG 203465 || ||| || || ||||||||||| || || ||||| || Sbjct 10076 GGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGCG 10116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788285698226000