Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3224 172 8e-38 >seq3224 Length=193136 Score = 172 bits (190), Expect = 8e-38 Identities = 688/1077 (64%), Gaps = 17/1077 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| || | ||| || | | ||||| ||||||||||| || || || ||| Sbjct 111448 GTGAACTGAATGGGTGCAGAGGCTGCCATCGTACGAAGATAGTACATGCCCGTCTTCAGA 111389 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 ||||| |||||||| || ||||||||||| | |||| | |||| || | | Sbjct 111388 CCCAGTTTCCATCCGGCAAAGTGCATGCTTGTGATTTTGCCCATAGTAGGCTCCTTGAGA 111329 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| || | ||||||| || || ||||| || |||| ||||| ||||||| | Sbjct 111328 TGAATGTTGAGCGACTGAGACTGGTCAATGAATGCGCCTCGGTCAGCAGCCATTTGAACG 111269 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 || ||| |||| | ||||||||| | || ||| ||| ||| || || | || | | Sbjct 111268 ATAGTCCTTTGGGAAATTTCCCATACTGTCTTGTAAAGAGCTTTAATGTCTGCGGGGATG 111209 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 |||| | ||||||| ||||| || || | ||| || ||||| || | || | Sbjct 111208 TTTGGAATGTTTTGAACTGAACCGCCGTCAGCTATGATACGGTTCTTCATGTTGTCGGAC 111149 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | || | | | | || || || || || ||||| ||||| || Sbjct 111148 CAGAGGCCGAGGTCGACAAGATCCTTCAGAAGCCACGGGTTGACAATTTGGAATTCACCC 111089 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | |||| |||| || || || || |||||||| | | |||| ||| ||| Sbjct 111088 GCAAGGACTCGCCGAGAATAGATGTTTGACGTGTATGGTTCAAAACATTCGTTGAATCCG 111029 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||| ||| || |||||| ||||| || || || | || || || | | || Sbjct 111028 AGAATCTGACTTGTGCTAGCAGTCGGCATGGGGGCAACAAGCAAGCTGTTGCGCACGCCG 110969 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 || || || | | ||| || | | |||||||||||| || |||| || | | Sbjct 110968 TGCTTTGCAATCTCCTTTTTGAGCGAATCCCAATCCCAAAGGTCACTAGGTGTCACTTTC 110909 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | ||| || || | || || | | | || || | || || || ||||| Sbjct 110908 CACATATCATACTGCAAAACACCCTGCGAAACGGGGGAGCCTTCGTACGTCTCGTAAGGA 110849 Query 77379 CCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAA 77438 || || | |||| || ||| ||| ||| || |||| |||||||||||||||| Sbjct 110848 CCCTCGACCTTGGCTATGTCGCAAGACGCGGTCAACGCGCCGTGATAAATTGTTTCGAAA 110789 Query 77439 ATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAA 77497 || | |||| | | |||| || || |||||||| | | ||| || || Sbjct 110788 ATTTGTATATTCAACTGCTTG-GCCTCGGGCGAGTCAAACGGCAAGCGCAAAGCAAGGAA 110730 Query 77498 GGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTT 77557 ||||| || | || || || || | |||| || | ||| | ||| | |||| Sbjct 110729 AGCATCGGCAAGCCCTTGCACACCGACCGCAATTGGACGATGGCGGAAATT---ACTTTT 110673 Query 77558 ---AGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614 ||| || |||| |||||||| || || || || || || | ||| | ||||| Sbjct 110672 CCGAGCCTCAGGAACAGGATAATGGTTGCCATCAATTATCTTGTTCAAATTGCGAACAAG 110613 Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAATCA-AATCTTC-----CATCTATAACAAA 77668 |||| || || | | |||| ||| ||| | || | || |||| | Sbjct 110612 AACTTGCGTAACTTCATGCAATTTACCAAAGTCATACTCGCCACGAACAGGATCAACATA 110553 Query 77669 CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728 || ||| || | |||||||| || ||||| || || |||| | || ||| | Sbjct 110552 TGTGGGCAAGGCAAGGGATGCTAGGTTGCAAACAGCAACTTCATCTGGTGCGGTATACTC 110493 Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788 || ||||| ||||| | ||| | | || || || ||||||| ||||||||||| Sbjct 110492 GATGATCTCCGTACACAAGTTAGAGCTTCGAATCGTTCCGAGATTTTTCTGGTTGCTCTT 110433 Query 77789 TTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTC 77845 | |||||||| |||||| ||||| || || ||| | ||||| || |||| | ||| Sbjct 110432 TCGATTGCATGCGTCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTCTGAGCTTC 110376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694638573223840