Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq1240 80.6 1e-10 >seq1240 Length=14842 Score = 80.6 bits (88), Expect = 1e-10 Identities = 140/199 (70%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 31073 TCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATA--CATGTCCG 31130 || |||| || | | || ||||| |||||||| |||| ||| || ||||| |||| Sbjct 8692 TCGGCGACCTCGGCGGTCAGCCGCTCCTGCACCTGCAAGCGCCGGGCATAGGCATGGAG- 8634 Query 31131 CCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATCGTGA 31190 || ||| | |||||| | ||| || | | || || || | ||| ||| ||| Sbjct 8633 -CACGCGTGCCAGCTTCGAGATGCCGACCACATGATTTTTGGGCAGATAGGCGAT-GTGC 8576 Query 31191 CCGTG-CCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGC 31249 || | |||| ||||||||| | ||||||||||||||| || | || ||||||||||| Sbjct 8575 GCGCGGCCGATGATCGGCGCCATGTGATGCTCGCAATGCGACTGGAACGGGATGTCGCGG 8516 Query 31250 ACCGTCACCATCTGGTCAT 31268 | | || |||| ||||| Sbjct 8515 AGCAGGACGATCTCGTCAT 8497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187281858033216