Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq3355 389 2e-103 seq372 264 7e-66 seq1151 102 5e-17 >seq3355 Length=30814 Score = 389 bits (430), Expect = 2e-103 Identities = 560/782 (72%), Gaps = 47/782 (6%) Strand=Plus/Minus Query 820 TGGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCT 879 ||||| | | ||| || |||||||| |||||||||| ||| ||||||| |||| | Sbjct 9167 TGGCACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGAT 9108 Query 880 GCGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATC 939 ||||| |||||| | ||| |||||||||||||| ||||| ||| |||||| | ||||| Sbjct 9107 GCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATC 9048 Query 940 GGTTGCGTACGAACTTCTGTGGTTCCTC-AGTG-----GCGACACGAACGTGAAGGCGCT 993 | |||| || ||||||||||| || | |||||| ||| ||| || Sbjct 9047 CATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAAC---AAGCTGCG 8991 Query 994 CAACGACAACGGCGTCACCATCTGGGACGAGTGGGC---CGACGCCGGCGGAAACCTCGG 1050 | || |||||| |||||||||||||| ||||| ||| | ||||| |||| || Sbjct 8990 C---GAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCG---ACCTGGG 8937 Query 1051 TCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGA- 1109 || || ||||||| ||||||||| ||||| ||| | || || || | | Sbjct 8936 GCCGGTGTACGGCGTGCAGTGGCGCAGCTGGC----CGACACCCGA----CGGCGGGCAC 8885 Query 1110 -TTGACCAGATCTCGGCCGCCGTGGAG--CTGCTTCGCGAGGACCCTGACTCGCGCCGGA 1166 | ||||||||| | | || ||| || | | || | | || ||||||||||| | Sbjct 8884 ATCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCA--ATCCGGACTCGCGCCGCA 8827 Query 1167 ACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACA 1226 | | || ||| |||||||| | ||| || | ||||| || || |||||| Sbjct 8826 TCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACG 8767 Query 1227 TCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCG 1286 | |||||| | ||||||| |||||| ||| ||| ||| | ||||||||||| | Sbjct 8766 CGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTG 8707 Query 1287 CGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGT 1346 | ||||| ||||| || ||||||||||| |||||| |||||||| ||| |||||||| Sbjct 8706 CCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCACATGA 8647 Query 1347 TCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACA 1406 ||||||||||| || |||| ||| || || | ||||||||||||||||||||||||| Sbjct 8646 TCGCGCAGCAGTGCGACCTGGCGGTCGGCGACTTCATCTGGACCGGCGGCGACTGCCACA 8587 Query 1407 TCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCCTACC 1466 |||||| ||||||| ||| |||| | |||||||| ||| | || | ||||||| Sbjct 8586 TCTACAGCAACCACCACGAGCAGGTGGAACTGCAGCTCTCCCGCCAGCCCCATCCCTACC 8527 Query 1467 CGAGGCTCGTGCT--ACACCACGCGC-------CGTCGATCTTCGACTACCGGTACGAGC 1517 | |||||| ||| || |||| |||||||||||||||||||||||||| Sbjct 8526 C------CGTGCTGGACATCAAGCGCAAGCCGGCGTCGATCTTCGACTACCGGTACGAGG 8473 Query 1518 ACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGAT 1577 || || | || || ||||| | | || ||| ||||||||||||| ||||| ||||||| Sbjct 8472 ACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCAAGGCGCCCGTGGCGGTCTGAT 8413 Query 1578 GG 1579 || Sbjct 8412 GG 8411 >seq372 Length=11520 Score = 264 bits (292), Expect = 7e-66 Identities = 433/616 (70%), Gaps = 10/616 (2%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||||||||| |||||||| ||| |||||| |||| |||||| ||| || || Sbjct 9524 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 9583 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTG-CGTACGAACT 954 |||||||||||| || ||||||| ||| | ||| | ||| | ||| ||| | Sbjct 9584 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGT-CGAGTT 9642 Query 955 TCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCAT 1014 ||||||||||| | |||||||| |||||| ||| | || | |||| ||| Sbjct 9643 GCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCAT 9702 Query 1015 CTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCG 1074 ||||||||| ||||| || | | || | ||||| || || || ||| ||| ||||| Sbjct 9703 CTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCG 9762 Query 1075 GCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGA 1134 ||||| || || | |||| | || | || ||||||||| || ||| | Sbjct 9763 CGACTGG---GT-GACGGCGGACGGCCGGCAC--ATCGACCAGATCAAGGGGCTGGTGCA 9816 Query 1135 GCTGCTTCGCGAGGA-CCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTG 1193 | | || || | ||| | ||||||||| | | || |||| |||||| ||| | Sbjct 9817 -CGACATCAAGACCAACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCG 9875 Query 1194 ACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACG 1253 | ||| || |||||| || ||||| || | |||||||| || |||| ||| Sbjct 9876 ATCTCCACGCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACG 9935 Query 1254 GCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCA 1313 ||||||| |||||||| ||||||||||| || ||||| ||||| || |||||||||| Sbjct 9936 GCCGGCTGTCGCTGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCA 9995 Query 1314 ATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGG 1373 | |||||| || ||||| ||| | |||||| | |||||||| ||| ||| | || Sbjct 9996 ACATCGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGG 10055 Query 1374 GTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGC 1433 | ||| | ||||||||||||||||| |||||| | || ||||||| |||| ||||||| Sbjct 10056 GCGAGTTCATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGC 10115 Query 1434 TGATGCAGCTCCGCCG 1449 |||||| |||| Sbjct 10116 GCGAGCAGCTTGGCCG 10131 >seq1151 Length=1634 Score = 102 bits (112), Expect = 5e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 23859 GGCGGCGTCCTGCCCGGTTACACCCCGGGCCGCGACGTGCACCGCTTCACCTCGCCCTCC 23918 || |||| ||||||||| ||| |||||||| | || || || |||| ||| || | Sbjct 790 GGTGGCGCCCTGCCCGGATACCCCCCGGGCAGGGATGTCTACACCTTCCTCTCCCCGACT 849 Query 23919 GGTGGAGAACTGCACCTGTCCGGCGGCGAAGCGATCATGCGCCCCGAGTGGACACGCGCA 23978 || || | || | |||||||||||||| || |||||||||||||||||||| ||||| Sbjct 850 GGCGGCGGCCTCGAACTGTCCGGCGGCGAGGCCATCATGCGCCCCGAGTGGACCCGCGCC 909 Query 23979 GTCGGC 23984 |||||| Sbjct 910 GTCGGC 915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296118636726381