Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq204 91.5 2e-13 seq654 82.4 8e-11 >seq204 Length=38477 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/158 (75%), Gaps = 10/158 (6%) Strand=Plus/Plus Query 120458 TGCCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTA--CG-TCATG 120514 |||| | ||| |||||||||||||| | || || |||||||| |||| || ||| | Sbjct 25182 TGCCCGGTCGGCCCGGGCCGTGGATCAGGCGCCGGATCGCTGGTGGCCTATTCGCTCAAG 25241 Query 120515 GGCATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCG 120574 |||||| ||||||| || ||||| ||||| |||||||||||||| | |||||| Sbjct 25242 ---ATCACCGACCTCGATCCCCTCCAGTACAACCTGCTGTTCGAGCGCTTCCTGAACCCG 25298 Query 120575 GATCGC--CCCGACTTTCCCGACATCGACGTCGACTTC 120610 || ||| ||| | || ||| ||||| |||||||| Sbjct 25299 GAGCGCGTGTCGA--TGCCGGACTTCGACATCGACTTC 25334 >seq654 Length=51332 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 95715 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 95774 ||||| || | |||| ||| || |||| || ||||||| || ||||||||||||||||| Sbjct 33192 CGGGGAGTGGCGCAGTCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA 33133 Query 95775 TCCTGTCACCCCGAC 95789 ||||||| ||||||| Sbjct 33132 TCCTGTCTCCCCGAC 33118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515001590018200