Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq234 86.0 2e-12 >seq234 Length=15970 Score = 86.0 bits (94), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 9/193 (5%) Strand=Plus/Plus Query 4596 ATCCACTCCCCGGGCGGCGACGTCTTCGAGGGGACGGCGATCTATAAC-------CTGCT 4648 ||| |||| || |||||| ||||| | || || |||||||| ||| | || Sbjct 8123 ATCAACTCGCCCGGCGGCTACGTCATGGAAGGTCTGGCGATCTTCAACGCCTTTGCGGCG 8182 Query 4649 GCGCAACCACCCGGCC--AGCGTCGACGTGTACATCGATGGCTTGGCTGCCTCGATGGCC 4706 ||| | | | |||| | ||| | | ||||||| ||| | || || || ||||| Sbjct 8183 GCGAAGGCGGCGGGCCGAAAGGTCACCATTCACATCGACGGCCTCGCCGCTTCCATGGCG 8242 Query 4707 TCGGTCATCGCCATGGCCGGCGACACCATCTACATGCCCGAGAACGCCATGATGATGGTG 4766 || |||||||||||||| |||||| ||| |||| |||| |||||| |||||||| | Sbjct 8243 TCCGTCATCGCCATGGCAGGCGACGAGATCATCATGGCCGACAACGCCCTGATGATGATT 8302 Query 4767 CATAAGCCCTGGG 4779 || || || |||| Sbjct 8303 CACAATCCGTGGG 8315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138359080431558