Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031099.1 Length=44536 Score E Sequences producing significant alignments: (Bits) Value seq234 129 2e-25 >seq234 Length=15970 Score = 129 bits (142), Expect = 2e-25 Identities = 184/252 (73%), Gaps = 19/252 (8%) Strand=Plus/Plus Query 4141 CGCATCAACTCGCCCGGCGGTGACGTCTACGAGGGCATCGCGATCCTCAACGCGCTCCGC 4200 || ||||||||||||||||| ||||| || || | |||||| ||||||| || || Sbjct 8120 CGGATCAACTCGCCCGGCGGCTACGTCATGGAAGGTCTGGCGATCTTCAACGC-CTTTGC 8178 Query 4201 GGCCGCGACGGC----------AAAGTCACCACCGTCGTCGACGGCCTCGCTGCGTCGAT 4250 ||| |||| ||| || ||||||| | ||||||||||||| || || || Sbjct 8179 GGCGGCGAAGGCGGCGGGCCGAAAGGTCACCATTCACATCGACGGCCTCGCCGCTTCCAT 8238 Query 4251 TGCCAGCGTCATTGCGATGGCCGGATCCGAGATCGTCATGATGCCG--AACTCGGAGATG 4308 || |||||| || ||||| || ||||||| ||||| |||| ||| | |||| Sbjct 8239 GGCGTCCGTCATCGCCATGGCAGGCGACGAGATCATCATG--GCCGACAACGCCCTGATG 8296 Query 4309 ATGATTCACGATCCGT-GGATGCTGACCATCGGCGATGC-CGAGGACATGCAGACCGCGG 4366 ||||||||| |||||| ||||| || |||||||||| || || | || ||| |||||| Sbjct 8297 ATGATTCACAATCCGTGGGATG-TGGCCATCGGCGACGCGCGTGAAC-TGCGCGCCGCGG 8354 Query 4367 CTGACAATCTCG 4378 | ||||| |||| Sbjct 8355 CGGACAAGCTCG 8366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142387713893556