Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq3355 145 1e-29 seq372 84.2 3e-11 >seq3355 Length=30814 Score = 145 bits (160), Expect = 1e-29 Identities = 230/327 (70%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 200834 GCGAGCTTTCCTGTCAGCTGTATCAGCGTAGCGCTGATATGTTTTTAGGCGTGCCGTTCA 200893 || |||| || || |||||||| ||||| || || || || || | ||||||||||||| Sbjct 8739 GCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCA 8680 Query 200894 ACATTGCATCATACGCACTACTGATTCACATGGTAGCCCAACAGGTCAATATGACTGTCG 200953 |||| || ||||| ||||| | |||||| | || || ||| | | || | |||| Sbjct 8679 ACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCG 8620 Query 200954 GTGATTTCGTATGGACGGGTGGTGACGTACACATCTACAGCAATCACGAAGAGCAGGTTC 201013 | || ||| | ||||| || || ||| |||||||||||||| ||| | |||||||| Sbjct 8619 GCGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGG 8560 Query 201014 GTCTGCAACTGTCTCGTGATCCGCGTCCTTTACCGAAGTTGAAAATTCTTCGTAAGCCGG 201073 ||||| || || || | || | ||| | || | || | || || ||||||| Sbjct 8559 AACTGCAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGG 8500 Query 201074 ACTCTATCTTCGATTACAAGTTCGAAGACTTTGAGCTTACTGG-TTACGAACCGCATCCT 201132 || |||||||| ||| || ||| ||||| ||| | |||| ||| | | ||||| Sbjct 8499 CGTCGATCTTCGACTACCGGTACGAGGACTTCGAG-GTCCTGGACTACCAGCACCATCCG 8441 Query 201133 GCGATAAAAGCACCGGTGGCGATATGA 201159 ||||| || || || |||||| | ||| Sbjct 8440 GCGATCAAGGCGCCCGTGGCGGTCTGA 8414 Score = 93.3 bits (102), Expect = 7e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 |||||||| ||| | || | || |||||||| ||||||| ||||||||| ||| || Sbjct 9112 CAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTG 9053 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 |||||||| ||||||||| |||||||||| | || | | | | ||| | ||| Sbjct 9052 AAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTG 8993 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCGCGAGACGA 200300 ||| | || ||||| ||||||||||||||||| || || Sbjct 8992 CGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGA 8949 >seq372 Length=11520 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 |||||||| ||| |||| || |||||||| || | || |||||||| || || Sbjct 9563 CAGATGCGGTTCGATCTGGCCGAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTG 9622 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 || || ||||| |||| || |||||||||| ||| |||||||| | | ||| Sbjct 9623 CGCTCGATCATCGTCGAGTTGCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTG 9682 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCG 200292 | ||| ||| |||| ||| ||||||||||||||| Sbjct 9683 CAGGATCGCAAGGTCAGCATCTGGGACGAATGGGCG 9718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783325914048000