Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq372 168 1e-36 seq3355 125 1e-23 >seq372 Length=11520 Score = 168 bits (186), Expect = 1e-36 Identities = 186/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130 ||||| |||||||||||||| || | ||||| | |||||||| || || ||| | Sbjct 9524 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 9583 Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190 | || |||||| || |||||||||| || |||||||||| || |||||| ||| || Sbjct 9584 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 9643 Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250 ||||||||||| ||||||||||||| | | | ||| | || ||| ||||| ||| Sbjct 9644 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATC 9703 Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGT 196310 ||||| || ||||| ||||| | || ||||| ||||| || || || ||||| ||||| Sbjct 9704 TGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGC 9763 Query 196311 GCATGGGT 196318 | ||||| Sbjct 9764 GACTGGGT 9771 Score = 95.1 bits (104), Expect = 2e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 196749 CTGTC-CTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACAT 196807 ||||| ||| || || ||||||||| || ||| ||||||| || || ||||||||||| Sbjct 9941 CTGTCGCTG-CAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACAT 9999 Query 196808 CGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGA 196867 ||| || || ||| | |||||| |||| ||||| | ||| | |||| || Sbjct 10000 CGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGA 10059 Query 196868 TTTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGC 196921 ||| ||||||| ||||||||| ||| || || || ||||| || || ||||| Sbjct 10060 GTTCATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGC 10113 >seq3355 Length=30814 Score = 125 bits (138), Expect = 1e-23 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130 ||||| ||||| || ||||| | | ||||| || |||||||| || |||||| | Sbjct 9151 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAAC 9092 Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190 | || ||||||||||| |||||||| ||| | |||||| ||| ||||||||||| ||| Sbjct 9091 GATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTG 9032 Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250 ||||||||||| | ||| | | ||| | | | ||| || | ||| | ||| Sbjct 9031 CTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATC 8972 Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCG 196309 ||||| || ||||| || || ||||| || || || || ||||| ||||||||| Sbjct 8971 TGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCG 8913 Score = 111 bits (122), Expect = 2e-19 Identities = 213/314 (68%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808 ||||| || ||||| |||||||||||||| ||| ||||||| || || |||||||||||| Sbjct 8734 CTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATC 8675 Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868 || ||||| || | |||||| | || |||||| | | ||| || || || Sbjct 8674 GCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGAC 8615 Query 196869 TTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGCCACGTTG 196928 ||| ||||||| |||||||| ||| | ||| ||||| | || |||| || Sbjct 8614 TTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACTG 8555 Query 196929 CAGCTCTCCCGTGTACCGCATGATCTGCCTAAGCTCGTTATCAAACGTAAACCGGATTCC 196988 ||||||||||| || ||| || ||| | ||||| || || |||| || Sbjct 8554 CAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCG 8495 Query 196989 ATTTTCGACTATAAGTTCGAAGATTTTGAAATCGTGGGTTACGAAAGCCACCCACCCATT 197048 || |||||||| || ||| || || || || ||| ||| | ||| || | || Sbjct 8494 ATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATC 8435 Query 197049 AAGGCACCGGTTGC 197062 ||||| || || || Sbjct 8434 AAGGCGCCCGTGGC 8421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770273682007960