Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq3355 215 2e-51 seq372 143 1e-29 >seq3355 Length=30814 Score = 215 bits (238), Expect = 2e-51 Identities = 366/528 (69%), Gaps = 2/528 (0%) Strand=Plus/Minus Query 51798 GACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTC 51857 ||||||| | ||||||||||| | |||||||||||||| || | ||| | || Sbjct 9100 GACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATC 9041 Query 51858 GGGGAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGC 51917 ||| |||||||||| || |||||| | || |||| | || | || |||| Sbjct 9040 CACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGC 8981 Query 51918 GTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAG 51977 || | ||| ||||||||||||||| || | || ||||||| || ||||| || | Sbjct 8980 GTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTG 8921 Query 51978 CAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGTCGTC 52037 |||||||| || ||| | | |||| | |||||| |||||| |||| || Sbjct 8920 CAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGTG 8861 Query 52038 AAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGT 52097 || | || ||| | |||| || || || ||| ||| || ||||| |||| Sbjct 8860 AAGACCATCAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCG 8801 Query 52098 GATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA 52157 || | | |||||| |||| |||||||| | | ||||| ||||| || || || Sbjct 8800 GACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCTACGTCGCGGAC 8741 Query 52158 GGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTT 52217 || ||||| |||||||| |||| ||||| ||||||||| ||| ||||||| ||||| Sbjct 8740 GGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTC 8681 Query 52218 AACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGT 52276 ||||| |||||||| | | || ||||| |||| || | |||||| | ||| | || Sbjct 8680 AACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGC-AGCAGTGCGACCTGGCGGT 8622 Query 52277 TGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCA 52324 || || ||||| ||||| || |||||| ||| ||||||| |||||| Sbjct 8621 CGGCGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCA 8574 >seq372 Length=11520 Score = 143 bits (158), Expect = 1e-29 Identities = 353/530 (67%), Gaps = 4/530 (1%) Strand=Plus/Plus Query 51808 AGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTGC 51867 ||||||||||| | ||||||||||||| |||| | | || | ||| ||||||| Sbjct 9585 AGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTGC 9644 Query 51868 TGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATTT 51927 ||||||| || ||| || ||||| | || || | | |||||||| | Sbjct 9645 TGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATCT 9704 Query 51928 GGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCGTA 51987 ||||||||||||||||||| ||| | || || || |||||||| ||||| ||||| Sbjct 9705 GGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGCG 9764 Query 51988 GTTGGGATGCTGGTGG-CGGCAAGGTCATCGATCAGATCCATGAAGTCGTCAAATCAATT 52046 |||| || || || |||| | |||||| |||||| | | | || | || Sbjct 9765 ACTGGG-TGACGGCGGACGGCCGGCACATCGACCAGATCAAGGGGCTGGTGCACGACATC 9823 Query 52047 AAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGGAT 52106 |||| | | || | || || || || ||| | || ||||| || ||| | | Sbjct 9824 AAGACCAACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTCCAC 9883 Query 52107 GATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTT 52166 | |||||| |||| || || ||| || ||||| |||||| || | || ||| Sbjct 9884 GCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGGCTG 9943 Query 52167 TCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226 ||| || | || ||||| || |||||||| ||| | ||||| ||||| ||||| ||| Sbjct 9944 TCGCTGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCC 10003 Query 52227 AGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGTTGGTGAATT 52285 |||||| | |||| || || || | || | |||| | || || || || || || Sbjct 10004 AGCTATGCGCTGCTCACCCACATGCTGGCGC-AGCAATGCGGGCTGGAGCCGGGCGAGTT 10062 Query 52286 CATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCAGG 52335 ||| ||||| || ||||| ||| | || |||||| | ||||||| Sbjct 10063 CATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGG 10112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190088142025410